Fig. 2.

Diversity and composition of microbial communities within three compartments in P. notoginseng.

A and B. Alpha diversity of bacterial and fungal communities.

C and D. NMDS based on bacterial and fungal communities between plant compartments (R, ANOSIM test statistic). Data estimates represent 26 sites and are analysed by means of one‐way ANOVA comparisons. The overall plant compartment effects (F[DFn, DFd] and P value) are displayed at the top of each graph.

E and F. Relative abundance of enriched bacterial (LDA > 2.0) and fungal (LDA > 3.0) taxa in three compartments.