TABLE 3.
Source | Sample daya | CT values (N1, N2, RP)b | Determination | Anticipated result based on occupancy or epidemiology | Interpretation | No. of casesc |
---|---|---|---|---|---|---|
Hospital | Baselinec | 30.9, 32.5, 30.1 | Positive | Positive | True positive | 30 |
8 | 30.6, 33.2, 31.0 | Positive | Positive | True positive | 28 | |
9 | 39.1, 37.5, 31.4 | Positive | Positive | True positive | 28 | |
9 (duplicate) | 38.4, 38.6, 28.2 | Positive | Positive | True positive | ||
12 | 38.3, 38.9, 31.2 | Positive | Positive | True positive | 33 | |
35 | 32.2, 33.5, 32.2 | Positive | Positive | True positive | 34 | |
35 (duplicate) | 32.7, 34.1, 34.2 | Positive | Positive | True positive | ||
50, subsample ae | 34.8, 37.6, 30.4 | Positive | Positive | True positive | 30 | |
50, subsample be | 41.9, 41.2, 33.4 | Positive | Positive | True positive | ||
51 | 38.9, 41.0, 28.3 | Positive | Positive | True positive | 29 | |
52 | 37.7, 40.3, 36.3 | Positive | Positive | True positive | 29 | |
WWTP, raw influent | Baselined | 30.3, 31.2, 28.3 | Positive | Positive | True positive | 7.9 |
8 | 34.0, ND, 30.3 | Indeterminate | Positive | 23.3 | ||
21 | 34.2, 35.2, 34.5 | Positive | Positive | True positive | 22.4 | |
WWTP, primary solids | Baselined | 31.8, 32.5, 34.6 | Positive | Positive | True positive | 7.9 |
8 | 30.8, 32.4, 30.9 | Positive | Positive | True positive | 23.3 | |
21 | 36.2, 39.2, 35.0 | Positive | Positive | True positive | 22.4 | |
Tap water | 14 | ND, ND, ND | Negative (no human DNA anticipated) | Negative | True negative | NA |
End of overnight sample collection period, which is also the same day samples were processed. Numbering of days was from the start of the study period in early July.
ND, not detected (CT ≥ 45).
Number of COVID-19 patients in the hospital tower during sample collection (hospital samples); 7-day moving average of new cases for WWTP catchment area (city of Charlottesville) (https://globalepidemics.org/key-metrics-for-covid-suppression/). NA, not applicable.
From Table 1.
The overnight composite sample was divided. Subsample a was processed the day it was collected. Subsample b was refrigerated and processed 24 h later.