Table 2. Performance of the Final pdCSM-Cancer Regression Models on Cross-Validation and Blind Test Sets.
| tissue | cell lines | Pearson (CV) | Pearson (blind test) |
|---|---|---|---|
| CNS | SF-268 | 0.66 | 0.59 |
| SF-295 | 0.68 | 0.59 | |
| SF-539 | 0.66 | 0.59 | |
| SNB-19 | 0.66 | 0.61 | |
| SNB-75 | 0.63 | 0.59 | |
| SNB-78 | 0.61 | 0.52 | |
| U251 | 0.69 | 0.63 | |
| XF-498 | 0.60 | 0.51 | |
| breast | BT-549 | 0.65 | 0.56 |
| HS-578 T | 0.64 | 0.54 | |
| MCF7 | 0.69 | 0.59 | |
| MDA-MB-231_ATCC | 0.68 | 0.58 | |
| MDA-MB-468 | 0.58 | 0.49 | |
| T-47D | 0.64 | 0.56 | |
| colon | COLO-205 | 0.67 | 0.58 |
| DLD-1 | 0.66 | 0.59 | |
| HCC-2998 | 0.63 | 0.63 | |
| HCT-116 | 0.69 | 0.61 | |
| HCT-15 | 0.63 | 0.56 | |
| HT29 | 0.67 | 0.65 | |
| KM12 | 0.66 | 0.59 | |
| KM20L2 | 0.62 | 0.53 | |
| SW-620 | 0.69 | 0.59 | |
| leukemia | CCRF-CEM | 0.65 | 0.59 |
| HL-60 TB | 0.63 | 0.56 | |
| K-562 | 0.66 | 0.57 | |
| MOLT-4 | 0.67 | 0.59 | |
| P388_ADR | 0.69 | 0.67 | |
| P388 | 0.74 | 0.65 | |
| RPMI-8226 | 0.63 | 0.59 | |
| SR | 0.63 | 0.62 | |
| ovarian | IGROV1 | 0.66 | 0.57 |
| NCI_ADR-RES | 0.65 | 0.56 | |
| OVCAR-3 | 0.67 | 0.58 | |
| OVCAR-4 | 0.63 | 0.62 | |
| OVCAR-5 | 0.64 | 0.54 | |
| OVCAR-8 | 0.68 | 0.59 | |
| SK-OV-3 | 0.65 | 0.57 | |
| prostate | DU-145 | 0.67 | 0.58 |
| PC-3 | 0.69 | 0.59 | |
| renal | 786-0 | 0.65 | 0.56 |
| A498 | 0.64 | 0.63 | |
| ACHN | 0.68 | 0.59 | |
| CAKI-1 | 0.65 | 0.56 | |
| RXF-393 | 0.65 | 0.56 | |
| RXF-631 | 0.66 | 0.63 | |
| SN12C | 0.65 | 0.59 | |
| SN12K1 | 0.74 | 0.65 | |
| TK-10 | 0.64 | 0.61 | |
| UO-31 | 0.65 | 0.55 | |
| non-small cell lung | A549_ATCC | 0.68 | 0.58 |
| EKVX | 0.62 | 0.53 | |
| HOP-18 | 0.54 | 0.48 | |
| HOP-62 | 0.65 | 0.59 | |
| HOP-92 | 0.60 | 0.57 | |
| LXFL-529 | 0.67 | 0.59 | |
| NCI-H226 | 0.64 | 0.54 | |
| NCI-H23 | 0.69 | 0.59 | |
| NCI-H322M | 0.64 | 0.67 | |
| NCI-H460 | 0.69 | 0.63 | |
| NCI-H522 | 0.67 | 0.57 | |
| small cell lung | DMS-114 | 0.67 | 0.58 |
| DMS-273 | 0.58 | 0.48 | |
| melanoma | LOX-IMVI | 0.67 | 0.59 |
| M14 | 0.66 | 0.58 | |
| M19-MEL | 0.66 | 0.59 | |
| MALME-3 M | 0.64 | 0.59 | |
| MDA-MB-435 | 0.68 | 0.59 | |
| MDA-N | 0.66 | 0.61 | |
| SK-MEL-28 | 0.66 | 0.59 | |
| SK-MEL-2 | 0.65 | 0.56 | |
| SK-MEL-5 | 0.66 | 0.64 | |
| UACC-257 | 0.65 | 0.59 | |
| UACC-62 | 0.67 | 0.59 |