TABLE 2.
Parameter | SdG5A |
AHA | ZPA | ||||
Catalytic domain | Accessory domain | Linker | CBM | Entire protein | |||
Acidic residues (%) | 9.9 | 7.5 | 27.8 | 9.3 | 10.0 | 10.2 | 15.0 |
Basic residues (%) | 11.7 | 8.6 | 5.6 | 5.2 | 9.8 | 7.8 | 11.8 |
Net charge density (z, %)a | 1.6 | 1.1 | −22.2 | −4.1 | −0.2 | −2.8 | −3.7 |
aNet charge density is estimated by z = (nbasic − nacidic)/length × 100%, where nbasic and nacidic are the number of basic and acidic residues, respectively. Acidic residues include glutamic acid and aspartic acid. Basic residues include histidine, lysine, and arginine. All sequences are presented in the Supplementary Material. AHA, α-amylase from Alteromonas haloplanctis; ZPA, α-amylase from Zunongwangia profunda.