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. 2021 Jul 18;42(4):417–422. doi: 10.24272/j.issn.2095-8137.2020.327

Table 1. Summary of sequenced catfish genomes.

Species Family Sequencing platform Assembly size (Mb) Identified genes Scaffold N50 (Mb) Contig N50 (kb) References
Longsnout catfish, Leiocassis longirostris Bagridae BGISEQ-500, Nanopore, Hi-C 703.19 23 708 28.03 3 090.00 This study
Yellow catfish, Pelteobagrus fulvidraco Bagridae Illumina, PacBio, Hi-C 732.80 24 552 25.80 1 100.00 Gong et al., 2018
Illumina, PacBio 714.00 21 562 3.65 970.00 Zhang et al., 2018
Glyptosternon maculatum Sisoridae PacBio, Illumina, 10X Genomics, BioNano 662.34 22 066 20.90 993.67 Liu et al., 2018
Channel catfish, Ictalurus punctatus Ictaluridae Illumina 845.40 21 556 7.25 48.50 Chen et al., 2016
Illumina, PacBio 783.00 26 661 7.73 77.20 Liu et al., 2016
Giant devil catfish, Bagarius yarrelli Sisoridae Illumina, PacBio 571.00 19 027 3.10 1 600.00 Jiang et al., 2019
Walking catfish, Clarias batrachus Clariidae Illumina 821.00 22 914 0.36 19.00 Li et al., 2018
Striped catfish, Pangasianodon hypophthalmus Pangasiidae Illumina 700.00 28 600 14.29 6.00 Kim et al., 2018