Table 2.
Genomic diversity in Alkanna populations.
| Locality | Greek region | N | π | He | FIS | p |
|---|---|---|---|---|---|---|
| A. sieberi | ||||||
| AT28 | Central Crete | 11 | 0.007 | 0.101 | −0.005 | 136 |
| AT27 | Western Crete | 11 | 0.006 | 0.090 | 0.071 | 39 |
| A. tinctoria | ||||||
| AT01 | South | 9 | 0.008 | 0.113 | −0.010 | 6 |
| AT10 | South | 8 | 0.006 | 0.097 | 0.052 | 25 |
| AT02 | South | 9 | 0.007 | 0.105 | 0.036 | 8 |
| AT06 | South | 9 | 0.008 | 0.110 | 0.009 | 9 |
| AT07 | South | 9 | 0.008 | 0.116 | −0.071 | 16 |
| AT08 | South | 9 | 0.007 | 0.102 | 0.049 | 18 |
| AT17 | Center | 9 | 0.007 | 0.096 | 0.081 | 13 |
| AT19 | Center | 9 | 0.006 | 0.092 | 0.089 | 19 |
| AT21 | Center | 9 | 0.006 | 0.085 | 0.025 | 17 |
| AT25 | Center | 9 | 0.006 | 0.080 | −0.036 | 6 |
| Mean ± S.E. for Southern-Central Greece | 0.0069 ± 0.0002 | 0.0996 ± 0.0037 | 0.0225 ± 0.015 | 1,551 | ||
| AT03 | North | 11 | 0.009 | 0.124 | 0.030 | 10 |
| AT04 | North | 9 | 0.009 | 0.125 | 0.059 | 11 |
| AT13 | North | 8 | 0.009 | 0.125 | 0.011 | 3 |
| ATA8 | North | 9 | 0.008 | 0.110 | 0.039 | 14 |
| Mean ± S.E. for Northern Greece | 0.008 ± 0.0002 | 0.121 ± 0.0036 | 0.034 ± 0.009 | 375 | ||
Summary statistics per sampling locality and mean of genetic data of Greek A. tinctoria and A. sieberi. Estimates are inferred from 16,107 SNPs present across 148 individuals. N, number of individuals analyzed; π, nucleotide diversity; He, gene diversity; FIS, inbreeding coefficient; and P, private alleles. The statistics of genetic groups identified in A. tinctoria by clustering-based approaches (North vs. South) are highlighted in bold and represented as mean ± standard error (SE).