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. 2021 Jul 28;11:15336. doi: 10.1038/s41598-021-94789-y

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© The Author(s) 2021

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

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Phylogenetic relationships of Clone 1 isolates. (A) Phylogenetic reconstruction of Clone 1 isolates (n = 58) and two Brazilian epidemic isolates (n = 2) was generated using core genome SNP data and the neighbor-joining method. Bootstrap support values (> 50%) after 100 replicate searches are shown. Isolates are labeled by sample source and patient disease status. (B) The same phylogeny is labeled by isolate country of origin and previously studied outbreaks are labeled with red bars.