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. 2021 Jul 20;2(3):100641. doi: 10.1016/j.xpro.2021.100641
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

CD11c-PE/Cy7 (Bu15) BioLegend Cat#: 337216
RRID: AB_2129790
CD123-FITC (6H6) BioLegend Cat#: 306014
RRID: AB_2124259
CD14-APC/Cy7 (HCD14) BioLegend Cat#: 325620
RRID: AB_830693
CD19-BUV737 (SJ25C1) BD Cat#: 564303
RRID: AB_2716867
CD3-BUV737 (UCHT1) BD Cat#: 564307
RRID: AB_2744390
CD56-BUV395 (NCAM16.2) BD Cat#: 563554
RRID: AB_2687886
HLA-DR-BV605 (L243) BioLegend Cat#: 307640 
RRID: AB_2561913

Biological samples

Human blood Healthy individuals from the University Medical Center Hamburg-Eppendorf Cat#: N/A

Chemicals, peptides, and recombinant proteins

DNA Suspension Buffer, pH 8.0, DNase/RNase Tested, PCR Grade Teknova Cat#: T0221
Sso Fast EvaGreen Supermix with Low ROX Bio-Rad Cat#: 1725210
Fast Probe Master Mix Biotium Cat#: 31005
Aqua ad iniectabilia (DNA-free water) Braun Cat#: 235 1744
ACK Lysing Buffer Lonza Cat#: 10-548E
Biocoll-Trennlösung Biochrom Cat#: L6115
Dulbecco’s Phosphate Buffered Saline (PBS) Sigma-Aldrich Cat#: D8537
Dymethyl sulfoxide (DMSO) Sigma-Aldrich Cat#: D5879-100ML
Fetal bovine serum (FBS) superior Biochrom Cat#: S0615
ROX Reference Dye Thermo Fisher Scientific Cat#: 12223012
RPMI-1640 Medium Life Technologies Cat#: 21875091

Critical commercial assays

C1 Single-Cell Reagent Kit for Preamp Fluidigm Cat#: 100-5319
DNeasy Blood & Tissue Kit (250) QIAGEN GmbH Cat#: 69506
GE 96.96 Dynamic Array™ DNA Binding Dye Sample & Assay Loading Reagent Kit with Control Line Fluid Fluidigm Cat#: 100-3415
QIAGEN Multiplex PCR Kit QIAGEN Cat#: 206143
Plasmacytoid Dendritic Cell Isolation Kit II, human Miltenyi Biotec Cat#: 130-097-415
Single Cell-to-CT qRT-PCR Kit Thermo Fisher Scientific Cat#: 4458237
SNP Type™ 192.24 Genotyping Reagent Kit with Control Line Fluid Fluidigm Cat#: 100-4136
Zombie Aqua™ Fixable Viability Kit BioLegend Cat#: 423102

Oligonucleotides

CYBB - pre-amplification – forward primer
AAGGAAATTTTCCAGATCATTAGGACA
This paper N/A
CYBB - pre-amplification – reverse primer
CCCAGTTACCCTGCTGTATTAGTA
This paper N/A
CYBB – quantitative PCR – forward primer
GAGAGTGTCTCAACACTTATTAGTGAC
This paper N/A
CYBB – quantitative PCR – reverse primer
CCCAGTTACCCTGCTGTATTAGTA
This paper N/A
CYBB - SNP typing (rs5964151) - forward primers
ACATGTTGAGAGTGTCTCAACACTTAT ACATGTTGAGAGTGTCTCAACACTTAG
This paper N/A
CYBB - SNP typing (rs5964151) - reverse primer
GGAGTATGCTCAGATGTCAATACTGTCA
This paper N/A
B2M - pre-amplification + quantitative PCR – forward primer
TTAGCTGTGCTCGCGCTAC
This paper N/A
B2M - pre-amplification + quantitative PCR – reverse primer
CTCTGCTGGATGACGTGAGTAA
This paper N/A
IRF2BP2 - pre-amplification + quantitative PCR – forward primer
GGCCCTTCGAGAGCAAGTTTAA
This paper N/A
IRF2BP2 - pre-amplification + quantitative PCR – reverse primer
TGGTTCTGGAGAGGGCTTCC
This paper N/A
TLR7 - pre-amplification – forward primer
TGGGCACCACACAGGT
This paper N/A
TLR7 - pre-amplification – reverse primer
CTGTTTCCCTATGGAACCCAGAA
This paper N/A
TLR7 - quantitative PCR – forward primer
ACAGGTGGTTGCTGCTTCA
This paper N/A
TLR7 - quantitative PCR – reverse primer
CTGTTTCCCTATGGAACCCAGAA
This paper N/A
TLR7 - SNP typing (rs3853839) – forward primers
CTTCAGTGCTTCCTGCTCTTTTTC CTTCAGTGCTTCCTGCTCTTTTTG
This paper N/A
TLR7 - SNP typing (rs3853839) – reverse primer
CTATGGAACCCAGAAGCAGGC
This paper N/A

Software and algorithms

CLC Main Workbench, version 7.9.1 QIAGEN Aarhus A/S https://digitalinsights.qiagen.com/
FlowJo10 FlowJo LLC http://www.flowjo.com
Fluidigm Real-Time PCR Analysis, version 4.3.1 Fluidigm https://www.fluidigm.com/
Fluidigm SNP Genotyping Analysis; version 4.3.2 Fluidigm https://www.fluidigm.com/
GraphPad Prism 9 GraphPad Software, LLC https://www.graphpad.com/
Microsoft PowerPoint 2016 Microsoft https://www.microsoft.com

Other

192.24 Dynamic Array™ IFC for SNP Genotyping Fluidigm BMK-M-192.24GT
48.48 Dynamic Array™ IFC for Genotyping Fluidigm BMK-M-48.48GT
96.96 Dynamic Array™ IFC for Gene Expression Fluidigm BMK-M-96.96
C1™ Single-Cell Preamp IFC, 5–10 μm Fluidigm 100-5757
qPCR foil SARSTEDT 95.1994
PCR plate half skirt, 96 well SARSTEDT 72.1979.102
Sterican single-use cannula, blunt (Ø 0.8 × 22 mm) Braun 918 0109
8-Channel pipette (0.5 μL–10 μL) Rainin 17013802
8-Channel pipette (5 μL–50 μL) Rainin 17013804
C1 Fluidigm N/A
Biomark HD Fluidigm N/A
Juno Fluidigm N/A
Fluorescence-activated cell sorter (FACS), e.g., FACSAria Fusion BD N/A
Microscope with 20× and 40× magnification N/A N/A
NanoDrop N/A N/A