TABLE 3.
Identification of CRISPR/Cas systems and prophage or prophage-like regions.
| Strain | CRISPR system | no. | Prophage |
| spacer | regions* | |
| SD FDAARGOS 654 | Type IA | 12; Type IIC | 19 | 1| 5 |
| SD NCTC13759 | Type IA | 3 | 2| 8 |
| SD NCTC6403 | Type IIC | 9 | 1| 2 |
| SD SCDR-SD1 | Type IA | 15; Type IIC | 20 | 0| 3 |
| SDSD ATCC 27957 | Type IA | 3 | 2| 6 |
| SDSD DB31752-13 | Type IA | 33; Type IIC | 11 | 0| 5 |
| SDSD DB49998-05 | Type IIC | 28 | 0| 4 |
| SDSD DB53993-17 | Type IA | 3 | 0| 2 |
| SDSD DB60705-15 | Type IIC | 42 | 3| 8 |
| SDSD Kdys0611 | Type IIC | 22 | 1| 12 |
| SDSD NCTC13731 | Type IA | 3 | 2| 8 |
| SDSD NCTC4669 | Type IA | 14; Type IIC | 22 | 3| 13 |
| SDSD NCTC4670 | Type IICA | 4 | 2| 11 |
| SDSD STREP97-15 | Type IIC | 7 | 3| 20 |
| SDSE NCTC11554 | Type IA | 13; Type IIC | 34 | 1| 5 |
| SDSE NCTC5370 | No detected | 1| 4 |
| SDSE NCTC5371 | Type IIC | 42 | 1| 5 |
| SDSE NCTC6179 | Type IA | 3; Type IIC | 9 | 2| 4 |
| SDSE NCTC6181 | Type IA | 3; Type IIC | 9 | 2| 6 |
| SDSE NCTC7136 | Type IA | 25; Type IIC | 15 | 3| 4 |
| SDSE NCTC9413 | Type IIC | 11 | 1| 5 |
| SDSE NCTC9414 | Type IIC | 42 | 1| 6 |
| SDSE 167 | No detected | 1| 4 |
| SDSE AC-2713 | Type IA | 15; Type IIC | 20 | 1| 8 |
| SDSE ATCC 12394 | Type IA | 30; Type IIC | 26 | 0| 4 |
| SDSE GGS 124 | Type IIC | 19 | 1| 4 |
| SDSE RE378 | Type IA | 14; Type IIC | 8 | 0| 5 |
| Streptococcus canis B700072 | Type IIC | 18 | 0| 4 |
| S. canis NCTC12191 | Type IA | 8; Type IIC | 2 | 2| 3 |
| S. canis HL_100 | Type IA | 12; Type IIC | 21 | 1| 4 |
| Streptococcus pyogenes emm64.3 | No detected | 1| 3 |
| S. pyogenes emm70 | No detected | 1| 3 |
| S. pyogenes emm97.1 | No detected | 1| 1 |
| S. pyogenes FDAARGOS_668 | Type IA | 7; Type IIC | 3 | 2| 4 |
| S. pyogenes JS12 | Type IIC | 3 | 1| 2 |
| S. pyogenes NCTC10085 | Type IA | 4; Type IIC | 3 | 2| 2 |
| S. pyogenes NCTC12052 | Type IIC | 3 | 3| 7 |
| S. pyogenes NCTC12696 | Type IIC | 0 | 3| 6 |
| S. pyogenes NCTC13736 | No detected | 4| 5 |
| S. pyogenes NCTC13738 | No detected | 3| 5 |
| S. pyogenes NCTC8322 | Type IA | 7; Type IIC | 10 | 3| 4 |
| S. pyogenes SP1336 | Type IA | 6; Type IIC | 0 | 2| 4 |
SDSE, Streptococcus dysgalactiae subsp. equisimilis; SDSD, S. dysgalactiae subsp. dysgalactiae.
*Complete prophages | total of putative prophage regions. Bovine SDSD isolates: ATCC 27957, NCTC13731, NCTC4669, and NCTC4670. Human SDSD strains: DB31752-13, DB49998-05, DB60705-15, and DB53993-17. Fish SDSD strain: SDSD Kdys0611 and SDSD STREP97-15.