Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2021 Jul 15;12:711359. doi: 10.3389/fmicb.2021.711359

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

Copyright © 2021 Nogal, Louca, Zhang, Wells, Steves, Spector, Falchi, Valdes and Menni.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

PMC Copyright notice

MetaCyc and KEGG results obtained for Coprococcus spp (A–C) and Lachnoclostridium spp (D). (A) Heatmap of the MetaCyc fermentative pathways. (B) PCA clustering based on the MetaCyc data related to the biosynthesis and degradation processes of each species. (C) Heatmap of the KEGG metabolic pathways. Only the pathways highly differential (for a given pathway, at least one species has an abundance value <5% and another species has a value >80%) between species are shown. (D) Heatmap of the MetaCyc pathways related to lipid metabolism in the three major species of Lachnoclostridium (species with >15 genomes). Of note, the shown Clostridium species belong to Lachnoclostridium (Yutin and Galperin, 2013). For all the heatmaps, the pathways and species are hierarchically clustered, and color intensities represent the percentage of genomes of a given species with a specific metabolic pathway. Pyr, pyruvate; ferm., fermentation; metab, metabolism; deg, degradation; biosyn, biosynthesis.