Table 3. TaTT variants and their initial activities in the overall reactions between R-PEA and pyruvate, R-PEA and α-ketoglutarate, L-leucine and α-ketoglutarate.
TaTT | Mutations | Initial activity, U/mg | Tm, °C | ||
---|---|---|---|---|---|
R-PEA + pyruvatea | R-PEA + α-ketoglutaratea | L-Leu + α-ketoglutarateb | |||
WT | No | 0.124 ± 0.005 | 0.147 ± 0.003 | 40 ± 5 | 88.0 ±0.6 |
0.004 ± 0.001c | 0.002 ± 0.001c | 23 ± 6c | |||
mP1 | R43S | 0.095 ± 0.004 | 0.14 ± 0.01 | 0.79 ± 0.02 | 85.8 ± 0.4 |
mP2 | G41V + Y101F | 0.004 ± 0.001 | 0.16 ± 0.01 | n.d. | 84.2 ± 0.3 |
mP3 | R43S+ G41V + Y101F | 0.004 ± 0.001 | 0.018 ± 0.006 | n.d. | 86.2 ± 0.2 |
0.008 ± 0.001c | 0.008 ± 0.001c | ||||
mO1 | S115R | 0.112 ± 0.005 | 0.064 ± 0.003 | 1.8 ± 0.4 | n.m. |
mO2 | Y166W + F39Y | n.d. | n.d. | n.d. | 83.9 ±0.2 |
mP2O1 | G41V + Y101F + S115R | 0.003 ± 0.001 | 0.004 ± 0.001 | n.d. | n.m. |
mP3O1 | R43S + G41V + Y101F + S115R | 0.003 ± 0.001 | 0.024 ± 0.002 | n.d. | 82.9 ± 0.4 |
0.012 ± 0.008c | 0.066 ± 0.003c | ||||
mP3O3 | R43S + G41V + Y101F + S115R + A108 | 0.007 ± 0.002c | n.d. | n.m. | n.m. |
mP3O4 | R43S + G41V + Y101F + S115R + Y166W + F39Y | n.d. | n.d. | n.d. | n.m. |
mP3O5 | R43S + G41V + Y101F + W32H | n.m. | 0.008 ± 0.001 | n.d. | n.m. |
mP3O6 | R43S + G41V + Y101F + F39Y | n.d. | n.d. | n.d. | n.m. |
mP3O7 | R43S + G41V + Y101F + F39Y + W32H | n.m. | 0.003 ± 0.001 | n.d. | n.m. |
Variants containing changes in P-pocket are named mP1-mP3; variants containing changes in O-pocket are named mO1-mO2; variants including changes in both pockets are named mPxOx accordingly. Apparent melting temperature is shown as well.
aInitial activity measured at pH 9.0 using the acetophenone assay
bInitial activity measured at pH 8.0 using the GDH assay
cThe reaction was carried out at pH 7.0 (50 mM Tris-HCl, 50°C)
n.m. = not measured
n.d. = not detected. The detection limit of the acetophenone assay is 0.0001 U/mg. The detection limit of the GluDH assay is 0.08 U/mg.