TABLE 1.
Data description.
| Data modality (platform) | Dataset | # of features | # of available samples | |||
|---|---|---|---|---|---|---|
| Labeled | Unlabeled | |||||
| Pos. | Neg. | |||||
| RNA-seq (Illumina HiSeq 2000) | Gene | KIRC | 20533 | 110 | 141 | 281 |
| HNSC | 20533 | 115 | 128 | 276 | ||
| NB | 60780 | 115 | 104 | 279 | ||
| Isoform | KIRC | 73601 | 110 | 141 | 281 | |
| HNSC | 73601 | 115 | 128 | 276 | ||
| NB | 263546 | 115 | 104 | 279 | ||
| Junction | KIRC | 249579 | 110 | 141 | 281 | |
| HNSC | 249579 | 115 | 128 | 276 | ||
| NB | 340416 | 115 | 104 | 279 | ||
| miRNA (Illumina GAIIx 2000) | KIRC | 1048 | 106 | 150 | 269 | |
| HNSC | 1048 | 116 | 130 | 276 | ||
| Methylation (Illumina Infinium HumanMethylation27) | KIRC | 21403 | 111 | 142 | 520 | |