Table 1.
The 33 cancer types in TCGA pan-cancer project
| Cancer types | Abbr | Normal tissues | Cancer tissues | Mutation | CNV |
|---|---|---|---|---|---|
| Kidney Renal Clear Cell Carcinoma | KIRC | 72 | 539 | 370 | 531 |
| Kidney Renal Papillary Cell Carcinoma | KIRP | 32 | 289 | 282 | 291 |
| Kidney Chromophobe | KICH | 24 | 65 | 66 | 69 |
| Brain Lower Grade Glioma | LGG | 0 | 529 | 526 | 516 |
| Glioblastoma Multiforme | GBM | 5 | 169 | 403 | 580 |
| Breast Invasive Carcinoma | BRCA | 113 | 1109 | 1026 | 1083 |
| Lung Squamous Cell Carcinoma | LUSC | 49 | 502 | 485 | 504 |
| Lung Adenocarcinoma | LUAD | 59 | 535 | 569 | 519 |
| Rectum Adenocarcinoma | READ | 10 | 167 | 151 | 168 |
| Colon Adenocarcinoma | COAD | 41 | 480 | 408 | 454 |
| Uterine Carcinosarcoma | UCS | 0 | 56 | 57 | 59 |
| Uterine Corpus Endometrial Carcinoma | UCEC | 35 | 552 | 531 | 542 |
| Ovarian Serous Cystadenocarcinoma | OV | 0 | 379 | 412 | 582 |
| Head and Neck Squamous Carcinoma | HNSC | 44 | 502 | 509 | 525 |
| Thyroid Carcinoma | THCA | 58 | 510 | 500 | 502 |
| Prostate Adenocarcinoma | PRAD | 52 | 499 | 498 | 495 |
| Stomach Adenocarcinoma | STAD | 32 | 375 | 439 | 444 |
| Skin Cutaneous Melanoma | SKCM | 1 | 471 | 468 | 370 |
| Bladder Urothelial Carcinoma | BLCA | 19 | 414 | 411 | 411 |
| Liver Hepatocellular Carcinoma | LIHC | 50 | 374 | 365 | 373 |
| Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma | CESC | 3 | 306 | 291 | 298 |
| Adrenocortical Carcinoma | ACC | 0 | 79 | 92 | 93 |
| Pheochromocytoma and Paraganglioma | PCPG | 3 | 183 | 184 | 165 |
| Sarcoma | SARC | 2 | 263 | 239 | 260 |
| Acute Myeloid Leukemia | LAML | 0 | 151 | 141 | 194 |
| Pancreatic Adenocarcinoma | PAAD | 4 | 178 | 178 | 187 |
| Esophageal Carcinoma | ESCA | 11 | 162 | 185 | 187 |
| Testicular Germ Cell Tumors | TGCT | 0 | 156 | 151 | 153 |
| Thymoma | THYM | 2 | 119 | 123 | 126 |
| Mesothelioma | MESO | 0 | 86 | 82 | 90 |
| Uveal Melanoma | UVM | 0 | 80 | 80 | 83 |
| Lymphoid Neoplasm Diffuse Large B-cell Lymphoma | DLBC | 0 | 48 | 37 | 51 |
| Cholangiocarcinoma | CHOL | 9 | 36 | 36 | 39 |
| In total | 730 | 10,363 | 10,295 | 10,944 |