Table 1.
Gene | Chromosome | HGVS DNA reference | HGVS protein reference | Variant type | Predicted effect | dbSNP/dbVar ID | Genotype (hetero zygous/homozygous) | ClinVar ID |
---|---|---|---|---|---|---|---|---|
ALK | Chr 2:29220829 (GRCh38.p12) | NC_000002.12:g.29220829G > C | NP_004295.2: p.Phe1174Leu | Missense | Substitution | rs863225281 | VAF 27% | VCV000217852.1 |
PIK3CA | Chr 3:179221045 (GRCh38.p12) | NC_000003.12: g.179221045del | NP_006209.2: p.Cys692Phefs*8 | Single-base pair deletion | Frameshift | VAF 26% | VCV000988765.1 |
(VAF) Variant allele frequency.