Table 3.
Hub genes identified in the blue and brown modules associated with breast tumor via WGCNA analysis.
| Module | Hub genes |
|---|---|
| blue | PPM1G, CDCA4, TACC3, CCNF, TIMELESS, SRSF1, CENPU, MRPL3, PSMD14, ISG20L2, ESRP1, TMEM206, SPC24, ASF1B, ZWINT, CDKN3, UHRF1, MIS18A, ZWILCH, MTHFD2, CKS2, CKAP2, ELAVL1, PCNA, FEN1, DTL, E2F1, H2AFZ, HDGF, PBK, CDC25C, ECT2, TUBA1C, SPC25, TROAP, HMMR, IQGAP3, ESPL1, UBE2T, EZH2, RACGAP1, OIP5, RAD51, CCNB1, LMNB1, NEK2, NUSAP1, GINS1, ERCC6L, CENPL, CENPF, DLGAP5, KIFC1, KIF11, KIF20A, CKAP2L, BUB1B, KIF23, PLK1, HJURP, NCAPH, NCAPG, KIF4A, TPX2 |
| brown | TJP3, POLR3K, ATP6V0B, PAFAH1B3, DTYMK, FBXL19, VARS2, TRAF2, VAMP8, LSM4, SNRPB, WDR34, CHMP4B, SLC25A39, HMOX2, KCTD13, CDK5, TPRN, RUVBL2, ZDHHC12, DPM2, BAX, TSEN54, AXIN1, TBC1D10B, KIF22, CACFD1, PRR14, NR2F6, COPE, SNRNP25, NUDT16L1, PGP, PPP4C, PHKG2, NMRAL1, ROGDI, MRPS34 |
Four selected genes are annotated in bold.