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. 2021 Apr 6;186(4):1800–1811. doi: 10.1093/plphys/kiab161

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© The Author(s) 2021. Published by Oxford University Press on behalf of American Society of Plant Biologists.

This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs licence (http://creativecommons.org/licenses/by-nc-nd/4.0/), which permits non-commercial reproduction and distribution of the work, in any medium, provided the original work is not altered or transformed in any way, and that the work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Effects of tissue source on TWAS results for maize endosperm color. A, Manhattan plots of TWAS conducted for maize endosperm color on each of seven tissues; each dot represents a single gene. The gray points adjacent to wc1 designate GRMZM2G089421. Horizontal dashed lines designate the 0.05 FDR significance cutoff. The red and blue triangles represent the known causal loci, y1 and wc1, respectively. The distributions of expression levels of the y1 (B) and wc1 (C) genes in inbred lines with yellow (yellow) and white (gray) endosperms. The density plots show the probability density across each bandwidth. Sum of densities × bandwidth equals to 1.