Table 3.
Details about the relationships in SynLethKG
| Type | No. of edges | No. of source nodes |
No. of target nodes |
|---|---|---|---|
| (Anatomy, downregulates, gene) | 31 | 4 | 24 |
| (Anatomy, expresses, gene) | 617 175 | 241 | 23 881 |
| (Anatomy, upregulates, gene) | 26 | 5 | 22 |
| (Compound, binds, gene) | 16 323 | 1922 | 2306 |
| (Compound, causes, side effect) | 139 428 | 1079 | 5702 |
| (Compound, downregulates, gene) | 21 526 | 747 | 2847 |
| (Compound, palliates, disease) | 384 | 215 | 50 |
| (Compound, resembles, compound) | 6266 | 1034 | 1055 |
| (Compound, treats, disease) | 752 | 385 | 77 |
| (Compound, upregulates, gene) | 19 200 | 721 | 3205 |
| (Disease, associates, gene) | 24 328 | 135 | 6572 |
| (Disease, downregulates, gene) | 7616 | 44 | 5730 |
| (Disease, localizes, anatomy) | 3373 | 123 | 398 |
| (Disease, presents, symptom) | 3401 | 122 | 427 |
| (Disease, resembles, disease) | 404 | 100 | 98 |
| (Disease, upregulates, gene) | 7730 | 44 | 5614 |
| (Gene, covaries, gene) | 62 987 | 9174 | 9706 |
| (Gene, interacts, gene) | 148 379 | 9633 | 14 275 |
| (Gene, participates, biological process) | 619 712 | 16 608 | 12 703 |
| (Gene, participates, cellular component) | 97 652 | 11 916 | 1670 |
| (Gene, participates, molecular function) | 110 042 | 14 404 | 3203 |
| (Gene, participates, pathway) | 57 441 | 11 519 | 2069 |
| (Gene, regulates, gene) | 267 791 | 4649 | 7105 |
| (Pharmacologic class, includes, compound) | 1205 | 377 | 837 |