Skip to main content
. Author manuscript; available in PMC: 2022 Aug 3.
Published in final edited form as: Cell Metab. 2021 Jun 25;33(8):1624–1639.e9. doi: 10.1016/j.cmet.2021.06.001

KEY RESOURCES TABLE

REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies
Chicken anti-GFP Abcam Cat# ab13970; RRID: AB_300798
Donkey anti-chicken IRDye 680RD LI-COR Biosciences Cat#: 926-68075; RRID:AB_10974977
Donkey anti-mouse IRDye 680RD LI-COR Biosciences Cat#: 926-68072; RRID: AB_10953628
Goat anti-guinea pig Alexa 594 Thermo Fisher Cat# A-11076; RRID: AB_141930
Goat anti-mouse Alexa 488 Thermo Fisher Cat# A-11001; RRID: AB_2534069
Goat anti-rabbit IRDye 800CW LI-COR Biosciences Cat#: 925-32211; RRID: AB_2651127
Guinea pig anti-PLIN1 Fitzgerald Cat# 20R-PP004; RRID: AB_1288416
Mouse anti-TFRC (H68.4) Invitrogen Cat# 13-6890; RRID: AB_86624
Mouse anti-TOM20 (F10) Santa Cruz Biotechnology Cat# sc-17764; RRID: AB_628381
Rabbit Anti-b-actin (13E5) Cell Signaling Technology Cat# 4970; RRID: AB_2223172
Rabbit anti-Ferritin-H Cell Signaling Technology Cat# 4393; RRID: AB_11217441
Rabbit anti-Fpn1 Novus Biologicals Cat# NBP1-21502; RRID: AB_2302075
Rabbit anti-HIF-2a Novus Biologicals Cat# NB100-122SS; RRID: AB_10000872
Rabbit anti-MGAT2 Proteintech Cat# 19514-1-AP; RRID: AB_10638917
Chemicals, peptides, and recombinant proteins
3a70B complete counting cocktail RPI SKU: 111154
3H-Triolein PerkinElmer Cat#: NEC075H050UC
14C-Palmiate PerkinElmer Cat#: NET431001MC
Acetaminophen Sigma-Aldrich Cat#: A7085
ADMEM/F12 Gibco Cat#: 12634010
Antifade mountant with DAPI Invitrogen Cat#: P36941
AP20187 (Dimerizer) Ariad Pharmaceuticals N/A
Bathophenanthrolinedisulfonic acid disodium salt hydrate Sigma-Aldrich Cat#: B1375
Benzonase Sigma-Aldrich Cat#: E8263
BSA Sigma-Aldrich Cat#: A8806
Collagenase IV Roche Cat#: 11088882001
Dexamethasone Sigma-Aldrich Cat#: D4902
Dispase II Roche Cat#: 04942078001
DMEM high glucose Gibco Cat#: 11965118
DMEM/F12 Gibco Cat#: 11320082
Fetal Bovine Serum Sigma-Aldrich Cat#: 12303C
Glucose Gibco Cat#: 15023021
GlutaMax Gibco Cat#: 35050079
Glutaraldehyde solution Sigma-Aldrich Cat#: G5882
Growth Factor-Reduced Matrigel Corning Cat#: 356230
HEPES Gibco Cat#: 15630080
Insulin Eli Lilly Product ID: A10008415
Intralipid Sigma-Aldrich Cat#: 6I141
Iron Standard for AAS Sigma-Aldrich Cat#: 16596
Isobutylmethylxanthine Sigma-Aldrich Cat#: I7018
Oil Red O Sigma-Aldrich Cat#: O0625
Palmitate Sigma-Aldrich Cat#: P5585
Paraformaldehyde Sigma-Aldrich Cat#: P6148
PEI linear MW25000 Polysciences Cat#: 23966-100
Penicillin and streptomycin Gibco Cat#: 15140122
Phenol red free DMEM/F12 Gibco Cat#: 21041025
Pluronic F-68 ThermoFisher Cat#: 24040032
Potassium ferrocyanide Sigma-Aldrich Cat#: 60279
Prolong Anti-Fade mounting medium Invitrogen Cat#: P36941
RNase I ThermoFisher Cat#: EN0601
Rosiglitazone Sigma-Aldrich Cat#: R2408
Sarkosyl Sigma-Aldrich Cat#: L9150
Sodium acetate Sigma-Aldrich Cat#: S2889
Sodium cacodylate Sigma-Aldrich Cat#: C0250
Thioglycolic acid solution Sigma-Aldrich Cat#: T6750
Trizol Invitrogen Cat#: 12034977
Tyloxapol Sigma-Aldrich Cat#: T0307
Critical commercial assays
DAB Quanto chromogen and substrate kit ThermoFisher Cat#: TA-125-QHDX
HR Series NEFA-HR(2) Color Reagent A Wako Cat#: 999-34691
HR Series NEFA-HR(2) Color Reagent B Wako Cat#: 991-34891
HR Series NEFA-HR(2) Color Solvent A Wako Cat#: 995-34791
HR Series NEFA-HR(2) Color Solvent B Wako Cat#: 993-35191
Infinity™ Cholesterol Reagent ThermoFisher Cat#: TR13421
Infinity™ Triglycerides Reagent ThermoFisher Cat#: TR22421
iScript™ cDNA Synthesis Kit BIO-RAD, Cat#: 170-8891
Mouse Adiponectin Elisa Kit Millipore Cat#: EZMADP-60K
Mouse Leptin ELISA Kit Crystal Chem Cat#: 90030
Mouse Ultrasensitive Insulin ELISA ALPCO Cat#: 80-INSMSU-E01
Oil red O stain kit Abcam Cat#: ab150678
Pierce BCA Protein Assay kit ThermoFisher Cat#: 23225
RIPA buffer Sigma-Aldrich Cat#: R0278
RNeasy Mini Kit (Qiagen) Qiagen Cat#: 74106
Serum iron/TIBC Kit Pointe Scientific Cat#: I750460
Sybr Green Master Mix Applied biosystems Cat#: A25778
TUNEL staining kit ThermoFisher Cat#: C10617
Deposited data
RNA-seq This paper GEO: GSE144938
16S rRNA-seq This paper SRA NCBI: PRJNA718550
Experimental models: Organisms/strains
Mouse: Tfrcfl/fl The Jackson Laboratory JAX028363; RRID:IMSR_JAX:028363
Mouse: Adipoq-Cre The Jackson Laboratory JAX028020; RRID:IMSR_JAX:028020
Mouse: Ucp1-Cre The Jackson Laboratory JAX024670; RRID:IMSR_JAX:024670
Mouse: TRE-Cre The Jackson Laboratory JAX006234; RRID:IMSR_JAX:006234
Mouse: Adipoq-rtTA Sun et al., 2012 N/A
Mouse: FAT-ATTAC Pajvani et al., 2005 N/A
Oligonucleotides
Primers for qPCR See Table S5 N/A
Recombinant DNA
pAAVK CAG-FLEX-eGFP See Data S1 N/A
pAAVK CAG-FLEX-Fpn1C326S See Data S2 N/A
pAAVK CAG-FLEX vector See Data S3; Gift from Hongkui Zeng Based on Addgene plasmid #51502
pHelper Cell Biolabs Part No: 340202
pRepCap Rec2 Gift from Deborah Young, University of Auckland, New Zealand N/A
pAAV-DJ Cell Biolabs Part No: VPK-420-DJ
Software and algorithms
Adobe photoshop Adobe https://www.adobe.com/products/photoshop.html; RRID: SCR_014199
Endnote Endnote http://endnote.com; RRID: SCR_014001
Excel Microsoft https://www.microsoft.com/enus/microsoft-365/excel; RRID:SCR_016137
Image J NIH https://imagej.nih.gov/ij/; RRID: SCR_003070
PowerPoint Microsoft https://www.microsoft.com/enus/microsoft-365/powerpoint
Prism 9 GraphPad software https://www.graphpad.com/; RRID: SCR_002798
Word Microsoft https://www.microsoft.com/enus/microsoft-365/word
Other
1200EX Transmission Electron Microscope JEOL N/A
60% HFD Green pellet Research diets D12492i
60% HFD paste Bio-serv S1850
6200 Isoperibol Calorimeter Parr Instrument Company N/A
a Nexera X2 UHPLC Shimadzu Scientific Instruments N/A
Agilent 2100 Bioanalyzer Agilent N/A
Amicon Ultra-15 centrifugal filter unit (3KD) Millipore UFC9003
Amicon Ultra-2 centrifugal filter unit (3KD) Millipore UFC200324
Beckman Coulter LS6500 multi-purpose scintillation counter Beckman N/A
BMDS IPTT reader BMDS Model: DAS-8007-IUS
Bruker Minispec mq10 Brucker Cat#: TMTA2892161
DNA/RNA shield collection tube ZYMO research Cat#: R1102
Doxycycline 60% HFD (600mg/kg diet) Bio-serv S5867
Doxycycline chow diet (600 mg/kg diet) Bio-serv S4107
Glucometers Bayer Contour N/A
Illumina Novaseq 6000 sequencing system Illumina N/A
Implantable electronic ID transponder IPTT-300 HTEC BMDS N/A
Keyence BZ-X710 Fluorescence Microscope Keyence N/A
LCMS-8050 Shimadzu Scientific Instruments N/A
Normal chow diet TEKLAD 2916
Odyssey Infrared Imager LI-COR Biosciences N/A
PGA synthetic absorbable suture 5.0 Henry Schein 31995
Rodent cold/thermo-Chamber Powers Scientific N/A
Scintillation vial RPI SKU: 121000CA
Seahorse XF Extracellualr Flux Analyzer Agilent N/A
Seahorse xFe24 islet capture fluxpak Agilent Cat#: 103518-100
TSE calorimetric system TSE system N/A