Table 5.
Primer name | MAF | NA | NPA | He | Ho | PIC |
---|---|---|---|---|---|---|
AH-SSR-V-12 | 0.692 | 2 | 2 | 0.426 | 0.000 | 0.335 |
AH-SSR-V-13 | 0.591 | 2 | 2 | 0.483 | 0.091 | 0.367 |
AH-SSR-V-14 | 0.625 | 2 | 2 | 0.469 | 0.000 | 0.359 |
AH-SSR-V-20 | 0.667 | 2 | 2 | 0.444 | 0.000 | 0.346 |
AH-SSR-V-23 | 0.773 | 2 | 2 | 0.351 | 0.091 | 0.290 |
AH-SSR-V-25 | 1.000 | 1 | 0 | 0.000 | 0.000 | 0.000 |
AH-SSR-V-26 | 0.429 | 4 | 4 | 0.694 | 0.000 | 0.641 |
AH-SSR-V-27 | 0.600 | 2 | 2 | 0.480 | 0.000 | 0.365 |
AH-SSR-V-28 | 0.615 | 3 | 3 | 0.544 | 0.000 | 0.484 |
AH-SSR-V-29 | 0.650 | 2 | 2 | 0.455 | 0.100 | 0.351 |
AH-SSR-V-30 | 0.588 | 6 | 6 | 0.616 | 0.118 | 0.589 |
AH-SSR-V-32 | 0.556 | 2 | 2 | 0.494 | 0.000 | 0.372 |
AH-SSR-V-37 | 1.000 | 1 | 0 | 0.000 | 0.000 | 0.000 |
AH-SSR-V-43 | 0.500 | 3 | 3 | 0.625 | 0.000 | 0.555 |
AH-SSR-V-44 | 0.875 | 2 | 2 | 0.219 | 0.250 | 0.195 |
AH-SSR-V-53 | 1.000 | 1 | 0 | 0.000 | 0.000 | 0.000 |
AH-SSR-V-58 | 0.500 | 2 | 2 | 0.500 | 0.000 | 0.375 |
AH-SSR-V-61 | 0.500 | 5 | 5 | 0.682 | 0.636 | 0.645 |
AH-SSR-V-62 | 1.000 | 1 | 0 | 0.000 | 0.000 | 0.000 |
AH-SSR-V-63 | 1.000 | 1 | 0 | 0.000 | 0.000 | 0.000 |
AH-SSR-V-64 | 1.000 | 1 | 0 | 0.000 | 0.000 | 0.000 |
AH-SSR-V-67 | 0.750 | 2 | 2 | 0.375 | 0.000 | 0.305 |
AH-SSR-V-68 | 1.000 | 1 | 0 | 0.000 | 0.000 | 0.000 |
AH-SSR-V-70 | 0.706 | 4 | 4 | 0.465 | 0.059 | 0.429 |
AH-SSR-V-87 | 0.750 | 2 | 2 | 0.375 | 0.000 | 0.305 |
AH-SSR-V-92 | 0.500 | 2 | 2 | 0.500 | 0.000 | 0.375 |
AH-SSR-V-118 | 0.423 | 3 | 3 | 0.648 | 0.692 | 0.573 |
AH-SSR-V-119 | 0.600 | 2 | 2 | 0.480 | 0.000 | 0.365 |
AH-SSR-V-121 | 0.750 | 2 | 2 | 0.375 | 0.500 | 0.305 |
AH-SSR-V-135 | 1.000 | 1 | 0 | 0.000 | 0.000 | 0.000 |
AH-SSR-V-138 | 1.000 | 1 | 0 | 0.000 | 0.000 | 0.000 |
AH-SSR-V-140 | 0.625 | 2 | 2 | 0.469 | 0.000 | 0.359 |
AH-SSR-V-142 | 0.857 | 2 | 2 | 0.245 | 0.000 | 0.215 |
AH-SSR-V-152 | 0.967 | 2 | 2 | 0.064 | 0.067 | 0.062 |
AH-SSR-V-159 | 0.500 | 3 | 3 | 0.625 | 0.000 | 0.555 |
AH-SSR-V-161 | 0.714 | 2 | 2 | 0.408 | 0.000 | 0.325 |
AH-SSR-V-162 | 0.733 | 2 | 2 | 0.391 | 0.000 | 0.315 |
AH-SSR-V-168 | 1.000 | 1 | 0 | 0.000 | 0.000 | 0.000 |
AH-SSR-V-178 | 1.000 | 1 | 0 | 0.000 | 0.000 | 0.000 |
AH-SSR-V-179 | 1.000 | 1 | 0 | 0.000 | 0.000 | 0.000 |
AH-SSR-V-180 | 0.636 | 3 | 3 | 0.529 | 0.000 | 0.473 |
AH-SSR-V-184 | 0.471 | 3 | 3 | 0.623 | 0.118 | 0.546 |
AH-SSR-V-185 | 0.667 | 3 | 3 | 0.500 | 0.000 | 0.449 |
AH-SSR-V-186 | 0.500 | 3 | 3 | 0.620 | 0.000 | 0.548 |
AH-SSR-V-187 | 0.667 | 2 | 2 | 0.444 | 0.000 | 0.346 |
Total | – | 97 | 85 | – | – | – |
Mean | 0.733 | 2.16 | 1.89 | 0.347 | 0.060 | 0.291 |
Mean % polymorphism: 73.33
MAF, major allele frequency; NA, total alleles; NPA, polymorphic alleles; He, gene diversity; Ho, heterozygosity; PIC, polymorphism information content