Bacterial and Virus Strains
|
Escherichia coli RNAi feeding strain |
Caenorhabditis Genetics Center |
HT115(DE3) |
E. coli feeding strain |
Caenorhabditis Genetics Center |
OP50 |
Ahringer RNAi library |
Source BioScience |
C. elegans RNAi Collection (Ahringer) |
Chemicals, Peptides, and Recombinant Proteins
|
Bacto Agar |
BioShop |
AGR001.1 |
Bacto Peptone |
BioShop |
PEP403.1 |
Sodium Chloride |
Chempur |
117941206 |
Streptomycin sulfate salt |
Sigma‐Aldrich |
S6501 |
Nystatin suspension 10,000 unit/mL |
Sigma‐Aldrich |
N1638 |
Carbenicillin disodium salt |
Roth |
6344.2 |
Magnesium Sulfate heptahydrate |
Sigma‐Aldrich |
M5921 |
Potassium dihydrogen phosphate |
Roth |
3904.1 |
di‐potassium hydrogen phosphate |
Roth |
P749.1 |
Calcium Chloride (dihydrate) |
BioShop |
CCL444.500 |
Cholesterol |
BioShop |
CHL500.5 |
Sodium azide |
Sigma‐Aldrich |
S2002 |
Tetracycline HCl |
BioShop |
TET701 |
IPTG |
BioShop |
IPT001 |
Methylviologen dichloride hydrate |
Sigma‐Aldrich |
36541 |
Polystyrene microspheres |
Polysciences Europe GmbH |
08691‐10 |
Tetramisole hydrochloride |
Sigma‐Aldrich |
L9756 |
Paraformaldehyde |
Sigma‐Aldrich |
158127 |
Hepes |
Roth |
HN77.3 |
Glutaraldehyde |
Sigma‐Aldrich |
340855 |
Ruthenium red |
Sigma‐Aldrich |
R2751 |
Gelatin |
BioShop |
GEL771 |
Osmium tetroxide |
Polysciences Europe GmbH |
0972B‐5 |
Potassium ferrocyanide |
Sigma‐Aldrich |
P3289 |
Thiocarbohydrazide |
Sigma‐Aldrich |
88535 |
Hydrogen peroxide solution |
Sigma‐Aldrich |
H1009 |
5‐Fluoro‐2'‐deoxyuridine |
Sigma‐Aldrich |
F0503 |
Sodium hypochlorite solution 14% |
VWR |
27900 |
Experimental Models: Organisms/Strains
|
C. elegans: wacIs6[myo‐3p::pas‐7::GGGGS Linker‐wrmScarlet::unc‐54 3′UTR, unc‐119(+)], wacIs14[myo‐3p::tomm‐20_1–50aa::attB5::mGFP::unc‐54‐3′UTR, unc‐119(+)]
|
This paper |
Strain: ACH91 |
C. elegans: wacIs1[myo‐3p::rpn‐5 CAI = 0.97::GGGGS Linker‐wrmScarlet::unc‐54 3′UTR, unc‐119(+)], wacIs14[myo‐3 promoter::tomm‐20_1–50aa::attB5::mGFP::unc‐54‐3′UTR, unc‐119(+)]
|
This paper |
Strain: ACH93 |
C. elegans: wacIs1[myo‐3p::rpn‐5 CAI = 0.97::GGGGS Linker‐wrmScarlet::unc‐54 3′UTR, unc‐119(+)], vit‐2(crg9070[vit‐2::gfp]) X
|
This paper |
Strain: ACH199 |
C. elegans: rrf‐3(b26) II; fem‐1(hc17) IV; uthEx633 [myo‐3p::GFP]
|
Caenorhabditis Genetics Center |
Strain: AGD885 |
C. elegans: wacIs1[myo‐3 promoter::rpn‐5 CAI = 0.97::GGGGS Linker‐wrmScarlet::unc‐54 3′UTR, unc‐119(+)], wacIs14[myo‐3 promoter::tomm‐20_1–50aa::attB5::mGFP::unc‐54‐3′UTR, unc‐119(+)], wwaEx2[unc‐122 promoter::GFP]
|
This paper |
TUR5 |
C. elegans: him‐5(e1490)V
|
Caenorhabditis Genetics Center |
Strain CB4088 |
C. elegans: zcIs14 [myo‐3::GFP(mit)]
|
Caenorhabditis Genetics Center |
Strain SJ4103 |
C. elegans: Bristol (N2) strain as wild‐type (WT) |
Caenorhabditis Genetics Center |
Strain: N2 |
Recombinant DNA
|
Plasmid: pCG150 (destination vector) |
Addgene |
#17247 |
Plasmid: pMT26 (modified pCG150) |
This paper |
N/A |
Plasmid: pSEM89 (wrmScarlet template) |
Boulin Lab |
El Mouridi et al (2017) |
Plasmid: L1_Tomm20_1–55aa_R5 (tomm‐20 1–55aa template) |
This paper/ synthesized by Invitrogen GeneArt Gene Synthesis |
N/A |
Plasmid: L1_rpn‐5_CAI097_R5 (rpn‐5 CAI = 0.97 template) |
This paper/ synthesized by Invitrogen GeneArt Gene Synthesis |
N/A |
Plasmid: L1_pas‐7_R5 (pas‐7 template)s |
This paper/ synthesized by Invitrogen GeneArt Gene Synthesis |
N/A |
Plasmid: mGFP (mGFP template) |
Bringmann Lab |
N/A |
Plasmid: pMT24 (pmyo‐3::pas‐7::wrmScarlet::unc‐54‐3′UTR in pCG150) |
This paper |
N/A |
Plasmid: pMT28 (pmyo‐3::tomm‐20 1–55aa::mGFP::unc‐54‐3′UTR in pCG150) |
This paper |
N/A |
Plasmid: pMT29 (pmyo‐3::rpn‐5 CAI = 0.97::wrmScarlet::unc‐54‐3′UTR in PCG150) |
This paper |
N/A |
Oligonucleotides
|
For the list of oligonucleotides see Appendix Table S3
|
N/A |
N/A |
Software and Algorithms
|
GraphPad Prism 8 |
GraphPad Software, Inc. |
N/A |
ZEN |
Zeiss |
N/A |
Office 365 |
Microsoft |
N/A |
ImageJ |
Wayne Rasband (NIH) |
N/A |
WormLab |
MBF Bioscience |
N/A |
Leica Las X |
Leica |
N/A |
Adobe Illustrator 2020 |
Adobe |
N/A |
eC‐CLEM |
Open Source |
N/A |