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. Author manuscript; available in PMC: 2021 Aug 5.
Published in final edited form as: Cancer Prev Res (Phila). 2020 Apr 6;13(6):497–508. doi: 10.1158/1940-6207.CAPR-19-0383

Table 1.

Gene ontology (GO) functional enrichment analysis for up- and downregulated genes after treatment with EGCG.

No. GO accession Upregulated NES FDR P
1 GO:0006082 Organic acid metabolic process 2.45 0 0
2 GO:0019752 Carboxylic acid metabolic process 2.36 0 0
3 GO:0032787 Monocarboxylic acid metabolic process 2.24 0 0
4 GO:0006631 Fatty acid metabolic process 2.15 0 0
5 GO:2001289 Lipid metabolic process 2.08 0 0.001
6 GO:0008654 Phospholipid biosynthetic process 1.98 0 0.002
7 GO:0044255 Cellular lipid metabolic process 1.97 0 0.003
8 GO:0016042 Lipid catabolic process 1.85 0.002 0.019
9 GO:0006732 Coenzyme metabolic process 1.85 0 0.018
10 GO:0044242 Cellular lipid catabolic process 1.84 0.005 0.017
11 GO:0046467 Membrane lipid biosynthetic process 1.83 0.004 0.018
12 GO:0008610 Lipid biosynthetic process 1.77 0 0.033
13 GO:0015980 Energy derivation by oxidation of organic compounds 1.77 0.005 0.032
14 GO:0044270 Nitrogen compound catabolic process 1.75 0.007 0.033
15 GO:0008202 Steroid metabolic process 1.73 0.002 0.038
16 GO:0006519 Amino acid and derivative metabolic process 1.72 0.002 0.043
17 GO:0006807 Nitrogen compound metabolic process 1.71 0 0.042
18 GO:0009056 Catabolic process 1.71 0 0.04
19 GO:0044248 Cellular catabolic process 1.65 0 0.065
20 GO:0006520 Amino acid metabolic process 1.64 0.015 0.067
No. GO accession Downregulated NES FDR P
1 GO:0007599 Hemostasis −1.91 0 0.063
2 GO:0030155 Regulation of cell adhesion −1.87 0 0.056
3 GO:0007596 Blood coagulation −1.83 0.004 0.073
4 GO:0009611 Response to wounding −1.83 0 0.058
5 GO:0050817 Coagulation −1.82 0.002 0.052
6 GO:0045597 Positive regulation of cell differentiation −1.81 0.004 0.051
7 GO:0050878 Regulation of body fluid levels −1.81 0.002 0.045
8 GO:0009605 Response to external stimulus −1.73 0 0.1
9 GO:0051707 Response to other organism −1.72 0 0.1
10 GO:0006952 Defense response −1.71 0 0.102
11 GO:0042060 Wound healing −1.7 0.002 0.103
12 GO:0008544 Epidermis development −1.68 0.003 0.118
13 GO:0009617 Response to bacterium −1.68 0.015 0.111
14 GO:0009607 Response to biotic stimulus −1.67 0.005 0.117
15 GO:0045595 Regulation of cell differentiation −1.67 0.002 0.11
16 GO:0051259 Protein oligomerization −1.66 0.012 0.113
17 GO:0007398 Ectoderm development −1.65 0.012 0.12
18 GO:0009888 Tissue development −1.61 0.003 0.157
19 GO:0016337 Cell–cell adhesion −1.61 0.009 0.156
20 GO:0050863 Regulation of t cell activation −1.59 0.017 0.169

Note: Gene sets with FDR < 0.25 are shown (top 20 when there are >20 gene sets with FDR < 0.25). Abbreviation: NES, normalized enrichment score.