Table 1.
No. | GO accession | Upregulated | NES | FDR | P |
---|---|---|---|---|---|
1 | GO:0006082 | Organic acid metabolic process | 2.45 | 0 | 0 |
2 | GO:0019752 | Carboxylic acid metabolic process | 2.36 | 0 | 0 |
3 | GO:0032787 | Monocarboxylic acid metabolic process | 2.24 | 0 | 0 |
4 | GO:0006631 | Fatty acid metabolic process | 2.15 | 0 | 0 |
5 | GO:2001289 | Lipid metabolic process | 2.08 | 0 | 0.001 |
6 | GO:0008654 | Phospholipid biosynthetic process | 1.98 | 0 | 0.002 |
7 | GO:0044255 | Cellular lipid metabolic process | 1.97 | 0 | 0.003 |
8 | GO:0016042 | Lipid catabolic process | 1.85 | 0.002 | 0.019 |
9 | GO:0006732 | Coenzyme metabolic process | 1.85 | 0 | 0.018 |
10 | GO:0044242 | Cellular lipid catabolic process | 1.84 | 0.005 | 0.017 |
11 | GO:0046467 | Membrane lipid biosynthetic process | 1.83 | 0.004 | 0.018 |
12 | GO:0008610 | Lipid biosynthetic process | 1.77 | 0 | 0.033 |
13 | GO:0015980 | Energy derivation by oxidation of organic compounds | 1.77 | 0.005 | 0.032 |
14 | GO:0044270 | Nitrogen compound catabolic process | 1.75 | 0.007 | 0.033 |
15 | GO:0008202 | Steroid metabolic process | 1.73 | 0.002 | 0.038 |
16 | GO:0006519 | Amino acid and derivative metabolic process | 1.72 | 0.002 | 0.043 |
17 | GO:0006807 | Nitrogen compound metabolic process | 1.71 | 0 | 0.042 |
18 | GO:0009056 | Catabolic process | 1.71 | 0 | 0.04 |
19 | GO:0044248 | Cellular catabolic process | 1.65 | 0 | 0.065 |
20 | GO:0006520 | Amino acid metabolic process | 1.64 | 0.015 | 0.067 |
No. | GO accession | Downregulated | NES | FDR | P |
1 | GO:0007599 | Hemostasis | −1.91 | 0 | 0.063 |
2 | GO:0030155 | Regulation of cell adhesion | −1.87 | 0 | 0.056 |
3 | GO:0007596 | Blood coagulation | −1.83 | 0.004 | 0.073 |
4 | GO:0009611 | Response to wounding | −1.83 | 0 | 0.058 |
5 | GO:0050817 | Coagulation | −1.82 | 0.002 | 0.052 |
6 | GO:0045597 | Positive regulation of cell differentiation | −1.81 | 0.004 | 0.051 |
7 | GO:0050878 | Regulation of body fluid levels | −1.81 | 0.002 | 0.045 |
8 | GO:0009605 | Response to external stimulus | −1.73 | 0 | 0.1 |
9 | GO:0051707 | Response to other organism | −1.72 | 0 | 0.1 |
10 | GO:0006952 | Defense response | −1.71 | 0 | 0.102 |
11 | GO:0042060 | Wound healing | −1.7 | 0.002 | 0.103 |
12 | GO:0008544 | Epidermis development | −1.68 | 0.003 | 0.118 |
13 | GO:0009617 | Response to bacterium | −1.68 | 0.015 | 0.111 |
14 | GO:0009607 | Response to biotic stimulus | −1.67 | 0.005 | 0.117 |
15 | GO:0045595 | Regulation of cell differentiation | −1.67 | 0.002 | 0.11 |
16 | GO:0051259 | Protein oligomerization | −1.66 | 0.012 | 0.113 |
17 | GO:0007398 | Ectoderm development | −1.65 | 0.012 | 0.12 |
18 | GO:0009888 | Tissue development | −1.61 | 0.003 | 0.157 |
19 | GO:0016337 | Cell–cell adhesion | −1.61 | 0.009 | 0.156 |
20 | GO:0050863 | Regulation of t cell activation | −1.59 | 0.017 | 0.169 |
Note: Gene sets with FDR < 0.25 are shown (top 20 when there are >20 gene sets with FDR < 0.25). Abbreviation: NES, normalized enrichment score.