Table 8.

Summary of most important MTAs for MARS or MAS

SNP	Allele.	Chr.	Pos.	Description
SNP_11184	T/C	1B	277	Associated with more than one trait such as SLN; E2 & C, SLT; E2 & C, SLU; E2 & C and also qualified FDR for SLN
SNP_13306	C/T	6B	51	Associated with more than one trait such as SLN; E2, SLT; E2, SLU; C
SNP_1870	T/C	5A	27	Associated with more than one trait such as SLT and SLU; E1
SNP_3408	A/G	5B	106	Associated with more than one trait such as SLN; E2, SLU; E2, SLT; C
SNP_4799	C/G	5B	106	Associated with more than one trait such as SLN; E2 & C, SLU; E2, SLT; C and also qualified FDR for SLN
SNP_5177	G/A	2D	25	Associated with more than one trait such as GWPS; E1 & C, SLU; E1 & E2, SL; C, SLN; C
SNP_1800	C/A	6A	159	Associated with LTH and found in both the environments and combined data
SNP_1852	A/C	6A	175
SNP_2448	G/A	1A	127	Associated with LTH and found in both the environments, combined data and also reported in the earlier study [103]
SNP_10924	A/G	5B	102	Associated with SLU, qualified FDR, and found in both the environments and combined data.
SNP_6294	C/T	6A	33	Associated with NSPP and qualified FDR
SNP_109	C/T	5A	169	Associated with GWPS and reported in the earlier study [105]
SNP_7209	C/G	4A	177	Associated with GWPS and reported in the earlier study [106]
SNP_12067	T/C	2A	132	Associated with LTH and reported in the earlier study [107]
SNP_598	C/A	2A	16	Associated with NSPP and reported in the earlier study [108]
SNP_454	A/G	4B	64

Chr: chromosome, Pos: position in cM