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. 2020 Dec 8;2(1):94–150. doi: 10.1039/d0cb00136h

Thermal denaturation studies (Tm values) of different ODN with complementary DNA or RNA and their half-life evaluations against phosphodiesterase I134.

ODN (5′ → 3′)a T m with DNAb (°C) T m with RNAb (°C) t 1/2 (min)
d(GCGTTTTTTGCT) 50 45
d(GCGTTT5′SPTTTGCT) 48 45
d(GCGTT5′SPT5′SPT5′SPTTGCT) 44 42
d(TTTTTTTTTT) 2
d(TTTTTTTTTPST) >40
d(TTTTTTTTT5′SPT) 8
d(TTTTTTTTTMeC) 7
d(TTTTTTTTT5′SPMeC) 35
a

PS and 5′SP refer to the phosphorothioate and 5′-SP internucleoside linkages respectively.

b

ODN not tested.