Skip to main content
. 2020 Dec 8;2(1):94–150. doi: 10.1039/d0cb00136h

Thermal denaturation studies (Tm values) of different ODN with complementary DNA or RNA and their half-life evaluations against SVPDE136.

ODN (5′ → 3′)a T m with DNAb (°C) T m with RNAb (°C) t 1/2 (min)
d(GCGTTTTTTGCT) 50 45
d(GCGTTT5′SPTLTTGCT) 52 53
d(GCGTT5′SPTL5′SPTL5′SPTLTGCT) 43 50
d(GCGT5′SPTLT5′SPTLT5′SPTLGCT) 53 60
d(TTTTTTTTT5′SPTL) >40
d(TTTTTTTTT5′SPMeCL) >40
d(TTTTTTTTTT) 8
d(TTTTTTTTTMeC) >40
d(TTTTTTTTTPST) >40
a

PS and 5′SP refer to the phosphorothioate and 5′-SP internucleoside linkages respectively. L refers to LNA residues.

b

ODN not tested.