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. 2021 Apr 21;6:88. [Version 1] doi: 10.12688/wellcomeopenres.16718.1

Table 6. Summary table with performance metrics reported as median (95% CI) and F 1 interquartile variance (IQV) after 200 bootstrap iterations.

The performance metrics are compared across pipelines using BoW together with distributed representations.

Pipeline Precision (%) Recall (%) F 1 (%) F 1 IQV
Unigrams 80.1 (73.9,86.0) 82.3 (74.1,88.6) 80.6 (75.8,85.2) 9.4
Unigrams + BioBERT mean pooling 83.7 (76.7,89.1) 80.4 (74.1,87.3) 81.7 (77.8,86.0) 8.2
Unigrams + BioBERT mean + min&max pooling 83.8 (75.6,88.8) 79.1 (73.4,85.4) 81.0 (77.2,85.4) 8.2