Table 5.

Results per-classed of HMIC with comparison with our baseline.

	Model			Precision	Recall	F1-Score
Baseline	CNN	Normal		87.83 ± 0.57	90.77 ± 0.65	89.28 ± 0.61
		Environmental Enteropathy		90.93 ± 0.61	82.48 ± 0.79	86.50 ± 0.71
		Celiac Disease	I	68.37 ± 1.98	68.62 ± 1.96	68.50 ± 1.96
			IIIa	56.26 ± 1.01	56.26 ± 2.21	59.29 ± 1.95
			IIIb	65.28 ± 0.97	98.28 ± 2.01	66.64 ± 1.87
			IIIc	62.66 ± 1.99	66.83 ± 1.99	64.68 ± 2.02
	Multilayer perceptron	Normal		87.97 ± 0.76	81.87 ± 0.76	84.81 ± 0.71
		Environmental Enteropathy		87.25 ± 0.69	90.18 ± 0.62	88.69 ± 0.66
		Celiac Disease	I	57.92 ± 2.07	60.74 ± 2.07	59.30 ± 2.09
			IIIa	62.58 ± 2.09	62.18 ± 2.09	60.89 ± 2.11
			IIIb	65.00 ± 1.89	66.09 ± 1.87	65.56 ± 1.88
			IIIc	67.97 ± 1.85	74.85 ± 1.72	71.24 ± 1.78
	DCNN	Normal		95.14 ± 0.42	94.91 ± 0.43	95.14 ± 0.42
		Environmental Enteropathy		92.22 ± 0.55	90.62 ± 0.60	91.52 ± 0.58
		Celiac Disease	I	75.41 ± 1.82	72.63 ± 1.89	73.99 ± 1.85
			IIIa	70.81 ± 1.92	72.47 ± 1.93	71.63 ± 1.79
			IIIb	81.08 ± 0.81	74.67 ± 1.84	77.74 ± 1.65
			IIIc	75.07 ± 1.83	76.37 ± 1.81	75.71 ± 1.81
HMIC	Non Whole Slide	Normal		89.97 ± 0.59	89.35 ± 0.61	89.66 ± 0.61
		Environmental Enteropathy		94.02 ± 0.49	97.30 ± 0.33	95.63 ± 0.33
		Celiac Disease	I	83.25 ± 1.58	80.91 ± 1.66	82.06 ± 1.62
			IIIa	80.34 ± 1.62	80.46 ± 1.71	80.40 ± 1.57
			IIIb	85.35 ± 1.49	81.77 ± 1.67	83.52 ± 1.47
			IIIc	85.54 ± 1.49	82.71 ± 1.60	84.10 ± 1.55
	Whole Slide	Normal		90.64 ± 0.57	90.06 ± 0.57	90.35 ± 0.58
		Environmental Enteropathy		94.08 ± 0.49	97.33 ± 0.42	98.68 ± 0.42
		Celiac Disease	I	88.73 ± 1.34	85.07 ± 1.51	86.86 ± 1.43
			IIIa	81.19 ± 1.65	81.19 ± 1.65	82.44 ± 1.51
			IIIb	90.51 ± 1.24	90.48 ± 1.27	90.49 ± 1.16
			IIIc	89.26 ± 1.31	90.18 ± 1.26	89.72 ± 1.28