Table 2.
sp. nov. |
sp. nov. |
sp. nov. |
sp. nov. |
sp. nov. |
subsp. kinnaridis subsp. nov. |
subsp. porcinus subsp. nov. |
subsp. murium subsp. nov. |
subsp. reuteri subsp. nov. |
subsp. suis subsp. nov. |
subsp. rodentium subsp. nov. |
||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Strain |
BG- AF3- AT |
pH52_ RY |
WF- MT5- AT |
BG- MG3- A |
Lr 3000T |
RRLNB _1_1 |
STM3 _1T |
STM2_1 |
WF-MO7 -1T |
WF- MA3- C |
AP3T |
CSF8 |
3c6T |
20–2 |
lpuph1T |
LTH 5448 |
DSM 20016T |
MM2 -3 |
ATCC 53608T |
pg- 3b |
100- 23T |
TMW 1.656 |
sp. nov. |
||||||||||||||||||||||
BG-AF3-AT |
– |
|||||||||||||||||||||
pH52_RY |
99.9 |
– |
||||||||||||||||||||
sp. nov. |
||||||||||||||||||||||
WF-MT5-AT |
99.8 |
99.8 |
– |
|||||||||||||||||||
BG-MG3-A |
99.8 |
99.7 |
99.9 |
– |
||||||||||||||||||
sp. nov. |
||||||||||||||||||||||
Lr3000T |
98.7 |
98.7 |
98.7 |
98.6 |
– |
|||||||||||||||||
RRLNB_1_1 |
98.8 |
98.7 |
98.7 |
98.7 |
99.9 |
– |
||||||||||||||||
sp. nov. |
||||||||||||||||||||||
STM3_1T |
98.2 |
98.2 |
98.3 |
98.2 |
99.2 |
99.2 |
– |
|||||||||||||||
STM2_1 |
98.2 |
98.2 |
98.3 |
98.2 |
99.2 |
99.2 |
100.0 |
– |
||||||||||||||
sp. nov. |
||||||||||||||||||||||
WF-MO7-1T |
97.1 |
97.1 |
97.2 |
97.1 |
97.3 |
97.3 |
97.3 |
97.3 |
– |
|||||||||||||
WF- MA3-C |
97.0 |
96.9 |
97.1 |
97.0 |
97.2 |
97.1 |
97.2 |
97.2 |
99.9 |
– |
||||||||||||
subsp. kinnaridis subsp. nov. |
||||||||||||||||||||||
AP3T |
99.8 |
99.7 |
99.7 |
99.6 |
98.6 |
98.7 |
98.2 |
98.2 |
97.3 |
97.1 |
– |
|||||||||||
CSF8 |
99.8 |
99.7 |
99.7 |
99.6 |
98.5 |
98.5 |
98.2 |
98.2 |
97.2 |
97.1 |
99.9 |
– |
||||||||||
L. reuteri subsp. porcinus subsp. nov. |
||||||||||||||||||||||
3c6T |
99.7 |
99.6 |
99.6 |
99.6 |
98.5 |
98.6 |
98.2 |
98.2 |
97.2 |
97.1 |
99.9 |
99.8 |
– |
|||||||||
20–2 |
99.6 |
99.6 |
99.6 |
99.5 |
98.3 |
98.4 |
98.0 |
98.0 |
97.1 |
97.0 |
99.8 |
99.8 |
99.7 |
– |
||||||||
subsp. murium subsp. nov. |
||||||||||||||||||||||
lpuph1T |
99.8 |
99.7 |
99.7 |
99.6 |
98.6 |
98.7 |
98.2 |
98.2 |
97.3 |
97.1 |
100.0 |
99.9 |
99.9 |
99.8 |
– |
|||||||
LTH5448 |
99.6 |
99.6 |
99.6 |
99.6 |
98.3 |
98.4 |
98.0 |
98.0 |
97.0 |
96.9 |
99.8 |
99.8 |
99.7 |
99.6 |
99.8 |
– |
||||||
subsp. reuteri subsp. nov. |
||||||||||||||||||||||
DSM 20016T |
99.7 |
99.6 |
99.6 |
99.7 |
98.4 |
98.5 |
98.0 |
98.0 |
96.9 |
96.8 |
99.7 |
99.7 |
99.6 |
99.6 |
99.7 |
99.7 |
– |
|||||
MM2-3 |
99.8 |
99.8 |
99.8 |
99.8 |
98.5 |
98.6 |
98.2 |
98.2 |
97.1 |
96.9 |
99.8 |
99.8 |
99.8 |
99.7 |
99.8 |
99.8 |
99.9 |
– |
||||
subsp. suis subsp. nov. |
||||||||||||||||||||||
ATCC 53608T |
99.8 |
99.7 |
99.7 |
99.6 |
98.5 |
98.5 |
98.1 |
98.1 |
97.3 |
97.1 |
99.9 |
99.9 |
99.8 |
99.9 |
99.9 |
99.8 |
99.7 |
99.8 |
– |
|||
pg-3b |
99.8 |
99.7 |
99.7 |
99.6 |
98.6 |
98.7 |
98.2 |
98.2 |
97.3 |
97.1 |
99.9 |
99.9 |
99.8 |
99.8 |
99.9 |
99.8 |
99.7 |
99.8 |
99.9 |
– |
||
subsp. rodentium subsp. nov. |
||||||||||||||||||||||
100-23T |
99.8 |
99.7 |
99.7 |
99.6 |
98.5 |
98.6 |
98.2 |
98.2 |
97.3 |
97.1 |
99.9 |
99.9 |
99.8 |
99.8 |
99.9 |
99.8 |
99.7 |
99.8 |
99.9 |
99.9 |
– |
|
TMW1.656 |
99.7 |
99.6 |
99.6 |
99.6 |
98.5 |
98.5 |
98.2 |
98.2 |
97.3 |
97.1 |
99.8 |
99.8 |
99.8 |
99.7 |
99.8 |
99.7 |
99.6 |
99.8 |
99.8 |
99.8 |
99.8 |
– |
DSM 4864T |
96.1 |
96.1 |
96.2 |
96.2 |
96.3 |
96.3 |
96.7 |
96.7 |
97.3 |
97.2 |
96.2 |
96.2 |
96.1 |
96.0 |
96.2 |
95.9 |
96.1 |
96.1 |
96.1 |
96.2 |
96.2 |
96.2 |
DSM 16041T |
95.7 |
95.7 |
95.7 |
95.7 |
96.0 |
95.9 |
96.3 |
96.3 |
97.2 |
97.1 |
95.8 |
95.7 |
95.7 |
95.6 |
95.8 |
95.5 |
95.7 |
95.7 |
95.7 |
95.8 |
95.8 |
95.8 |
DSM 6035T |
96.1 |
96.0 |
96.2 |
96.1 |
96.2 |
96.2 |
96.4 |
96.4 |
97.5 |
97.3 |
96.1 |
96.1 |
96.1 |
95.9 |
96.1 |
95.9 |
96.0 |
96.1 |
96.0 |
96.1 |
96.1 |
96.0 |
DSM 8475T |
97.3 |
97.2 |
97.3 |
97.2 |
97.3 |
97.2 |
96.9 |
96.9 |
97.6 |
97.5 |
97.3 |
97.2 |
97.2 |
97.0 |
97.3 |
97.0 |
97.1 |
97.2 |
97.1 |
97.3 |
97.3 |
97.1 |
DSM 5837T |
96.7 |
96.6 |
96.8 |
96.7 |
96.9 |
96.9 |
96.8 |
96.8 |
98.5 |
98.4 |
96.7 |
96.6 |
96.6 |
96.4 |
96.7 |
96.4 |
96.6 |
96.6 |
96.6 |
96.7 |
96.7 |
96.7 |
DSM 13145T |
97.3 |
97.2 |
97.2 |
97.1 |
97.4 |
97.4 |
97.1 |
97.1 |
98.4 |
98.3 |
97.1 |
97.1 |
97.1 |
96.9 |
97.1 |
96.9 |
97.0 |
97.1 |
97.0 |
97.1 |
97.1 |
97.0 |
DSM 14060T |
95.0 |
94.9 |
95.2 |
95.2 |
94.9 |
94.9 |
95.2 |
95.2 |
95.6 |
95.5 |
95.0 |
95.0 |
95.0 |
94.9 |
95.0 |
94.9 |
95.0 |
95.1 |
95.0 |
95.0 |
95.0 |
94.9 |