Table 2.
Genome characteristics for Vibrio aestuarianus subsp. cardii subsp. nov., V. aestuarianus subsp. francensis subsp. nov and V. aestuarianus subsp. aestuarianus subsp. nov. type strain (LMG 7909T)
|
Strain |
Source |
Genome size (bp) |
No. of CDS |
No. of tRNA |
G+C content (%) |
N50 (bp) |
L50 |
CheckM Completness |
CheckM contamin. |
Accession no. |
No. of reads |
|---|---|---|---|---|---|---|---|---|---|---|---|
|
12/122 3T3T |
Cerastoderma edule |
4 350 835 |
4449 |
97 |
42.73 |
50 782 |
25 |
100 % |
0.91 % |
694 942 |
|
|
15/061 1T1 |
Cerastoderma edule |
4 099 086 |
4205 |
102 |
42.89 |
43 962 |
29 |
100 % |
0.91 % |
843 350 |
|
|
15/064 3T2 |
Cerastoderma edule |
4 024 371 |
4101 |
91 |
42.79 |
44 282 |
29 |
99.93 % |
0.83 % |
703 751 |
|
|
15/075 3T2 |
Cerastoderma edule |
4 394 098 |
4614 |
98 |
42.68 |
55 001 |
26 |
99.90 % |
1.10 % |
1 091 426 |
|
|
LMG 7909T |
Type strain |
4 229 739 |
4020 |
103 |
42.67 |
96 002 |
16 |
100 % |
0.09 % |
897 933 |
|
|
01/032 |
Crassostrea gigas |
4 204 160 |
4188 |
84 |
42.83 |
– |
– |
99.72 |
0.12 % |
– |
|
|
01/151 |
Crassostrea gigas |
4 368 412 |
4350 |
84 |
42.73 |
– |
– |
100 % |
0.12 % |
– |
|
|
01/308 |
Crassostrea gigas |
4 510 343 |
4534 |
85 |
42.52 |
– |
– |
100 % |
0.16 % |
– |
|
|
02/041T |
Crassostrea gigas |
4 196 441 |
4063 |
84 |
42.83 % |
99.72 % |
0.12 % |
– |
|||
|
07/115 |
Crassostrea gigas |
4 245 988 |
4243 |
84 |
42.79 |
– |
– |
99.72 % |
0.12 % |
– |