Table 2.
Nucleotide substitutions in ITS and LSU sequences in type strains of Camptobasidium species, Psychromyces glacialis and selected closely related species of genera Cryolevonia, Glaciozyma, Phenoliferia, Rhodotorula and Oberwinklerozyma
Strains: 1, Cr. schafbergensis PYCC 8347T; 2, Cr. giraudoae CRUB 2086T;3, C. hydrophilum CCM 8060T; 4, C. gelus CBS 8941T; 5, C. gelus EXF-12745; 6, C. arcticum EXF-12713T; 7, Camptobasidium sp. EXF-12685; 8, Ps. glacialis EXF-13111T; 9, G. antarctica CBS5942T; 10, G. watsonii CBS10986T; 11, G. martinii CBS 10620T; 12, Ph. psychrophenolica. CBS 10438T;13, ‘R. svalbardensis’ MBL-I; 14, O. yarrowii CBS 7417T.Values above the diagonal are numbers of nucleotide substitutions and sequence similarity (%, in parentheses) in the LSU. Values below the diagonal are numbers of nucleotide substitutions and sequence similarity (%, in parentheses) in the sequences of the ITS.
|
Species |
1 |
2 |
3 |
4 |
5 |
6 |
7 |
8 |
9 |
10 |
11 |
12 |
13 |
14 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
1 |
4 (99.2) |
10 (97.9) |
4 (99.2) |
4 (99.2) |
7 (98.5) |
12 (97.5) |
22 (95.4) |
19 (96.0) |
20 (95.8) |
25 (94.8) |
13 (97.3) |
22 (95.4) |
22 (95.2) |
|
|
2 |
14 (97.3) |
17 (96.9) |
12 (97.9) |
12 (97.9) |
15 (97.4) |
19 (96.7) |
30 (94.4) |
26 (95.5) |
28 (95.1) |
35 (93.7) |
15 (97.4) |
29 (94.9) |
26 (95.3) |
|
|
3 |
53 (88.8) |
65 (87.0) |
8 (98.5) |
8 (98.5) |
12 (97.8) |
11 (98.0) |
26 (95.1) |
26 (95.2) |
28 (94.9) |
30 (94.3) |
18 (96.7) |
25 (95.4) |
27 (94.9) |
|
|
4 |
53 (88.9) |
71 (86.1) |
26 (94.9) |
0 (100) |
5 (99.1) |
15 (97.4) |
30 (94.4) |
27 (95.2) |
29 (94.9) |
33 (94.1) |
18 (96.9) |
28 (95.1) |
24 (95.7) |
|
|
5 |
53 (88.9) |
71 (86.1) |
26 (94.9) |
0 (100) |
5 (99.1) |
15 (97.4) |
30 (94.4) |
27 (95.3) |
29 (94.9) |
33 (94.1) |
18 (96.9) |
28 (95.1) |
24 (95.7) |
|
|
6 |
49 (89.7) |
67 (86.8) |
16 (96.8) |
17 (96.8) |
17 (96.8) |
14 (97.6) |
35 (93.5) |
26 (95.5) |
28 (95.1) |
32 (94.2) |
19 (96.7) |
33 (94.3) |
29 (94.8) |
|
|
7 |
55 (88.7) |
68 (86.7) |
40 (91.9) |
45 (91.3) |
45 (91.3) |
40 (92.2) |
31 (94.2) |
28 (95.1) |
26 (95.5) |
36 (93.5) |
21 (96.3) |
29 (94.9) |
35 (93.7) |
|
|
8 |
54 (88.5) |
71 (85.6) |
56 (88.6) |
57 (89.0) |
57 (89.0) |
54 (89.5) |
50 (90.2) |
33 (93.1) |
33 (93.9) |
40 (92.3) |
22 (95.9) |
2 (99.6) |
32 (93.9) |
|
|
9 |
67 (86.1) |
81 (84.0) |
69 (85.9) |
81 (84.3) |
81 (84.3) |
77 (85.09 |
81 (84.3) |
83 (84.1) |
7 (98.8) |
10 (98.2) |
24 (95.8) |
32 (94.4) |
31 (94.4) |
|
|
10 |
61 (87.2) |
77 (84.7) |
75 (84.8) |
88 (83.1) |
88 (83.1) |
81 (84.4) |
81 (84.3) |
79 (84.9) |
40 (92.6) |
14 (97.5) |
26 (95.5) |
32 (94.4) |
33 (94.1) |
|
|
11 |
61 (87.0) |
77 (84.4) |
77 (84.2) |
82 (84.0) |
82 (84.0) |
81 (84.1) |
67 (86.9) |
78 (84.9) |
47 (91.1) |
52 (90.2) |
33 (94.1) |
40 (92.8) |
36 (93.3) |
|
|
12 |
65 (86.2) |
81 (83.6) |
70 (85.6) |
71 (86.1) |
71 (86.1) |
67 (86.8) |
70 (86.4) |
49 (90.4) |
82 (84.0) |
94 (81.8) |
89 (82.5) |
20 (96.5) |
20 (96.4) |
|
|
13 |
52 (88.9) |
69 (86.0) |
53 (89.2) |
56 (89.2) |
56 (89.2) |
50 (90.3) |
49 (90.4) |
5 (99.1) |
79 (84.9) |
76 (85.5) |
75 (85.4) |
46 (91.0) |
30 (94.6) |
|
|
14 |
93 (81.0) |
107 (79.2) |
69 (86.1) |
73 (86.0) |
73 (86.0) |
69 (86.7) |
73 (85.9) |
64 (87.5) |
82 (84.0) |
90 (82.6) |
83 (83.7) |
74 (85.6) |
61 (88.1) |