Table 2.
Microbiota | Metabolites | Chemical Formula | Class | References |
---|---|---|---|---|
Lactobacillus pentosus | Formate | CH2O2 | SCFA | [85] |
Prevotella spp., Streptococcus spp. Bacteroides spp., Clostridium spp., Ruminococcus spp. Blautia hydrogentrophica, Bifidobacterium longum SP 07/3, Bifidobacterium bifidum MF 20/5), Lactobacillus acidophilus CRL 1014, Akkermansia muciniphilia | Acetate | CH3COOH | SCFA | [86,87,88,89] |
Ruminococcus spp., Salmonella spp., Veillonella spp., Bacteroides spp., Clostridium spp. Dalister succinatiphilus, Eubacterium halli, Megasphaera elsdenii, Phascolarctobacterium succinatutens, Roseburia inulinivorans, Akkermansia muciniphilia, Coprococcus catus, Phascolarctobacterium succinatutens, Lactobacillus rhamnosus GG (LGG), Lactobacillus gasseri PA 16/8, Bifidobacterium longum SP 07/3, Bifidobacterium bifidum MF 20/5), Lactobacillus salivarius spp. salcinius JCM 1230, Lactobacillus agilis JCM 1048, Lactobacillus acidophilus CRL 1014 | Propionate | CH3CH2COOH | SCFA | [87,88,90,91] |
Anaerostipes spp., Clostridium spp., Ruminococcus spp. Coprococcus catus, Roseburia inulinivorans, Roseburia intestinalis, Coprococcus comes, Coprococcus eutactus, Clostridium symbiosum, Eubacterium rectale, Eubacterium hallii, Faecalibacterium prausnitzii, Lactobacillus salivarius spp. salcinius JCM 1230, Lactobacillus agilis JCM 1048, Lactobacillus acidophilus CRL 1014 | Butyrate | CH3(CH2)2COOH | SCFA | [90,92,93,94] |
Bifidobacterium spp., Lactobacillus spp. Bifidobacterium longum SP 07/3, Bifidobacterium bifidum MF 20/5, Lactobacillus rhamnosus GG (LGG), Lactobacillus gasseri PA 16/8, Lactobacillus salivarius spp. salcinius JCM 1230, Lactobacillus agilis JCM 1048, Lactobacillus acidophilus CRL 1014 | Lactate | CH3CH(OH)CO2H | SCFA | [88,95,96] |
Prevotella copri, Ruminococcus flavefaciens, Phascolarctobacterium succinatutens | Succinate | (CH2)2(CO2H)2 | SCFA | [97,98] |
Nitrosomonas europaea and Nitrosococcus oceani | Methanol | CH3OH | Alcohol | [80,81] |
Lactobacillus fermentum, Weissella confuse, and Saccharomyces cerevisiae, Zymomonas mobilis, | Ethanol | CH3CH2OH | Alcohol | [99] |
Clostridium acetobutylicum ATCC 824, Escherichia coli | Isopropanol | CH3CHOHCH3 | Alcohol | [100,101] |
Corynebacterium glutamicum | Glycolate | C2H3O3 | Alcohol | [102] |
Clostridium sp. strain G10 | Acetone | CH3COCH3 | Alcohol | [103] |
Corynebacterium glutamicum | Ethylene glycol | (CH2OH)2 | Alcohol | [102] |
Anaerococcus hydrogenalis, Clostridium asparagiforme, Clostridium hathewayi, Clostridium sporogenes, Edwardsiella tarda, Escherichia fergusonii, Proteus penneri and Providencia rettgeri | TMAO | (CH3)3NO | Protein | [104] |
Helicobacter pylori, and Salmonella enterica | LPS | C175H317N5O101P6 | Lipid | [105] |
Lactobacillus iners | Inerolysin | INY | Lipid | [84] |
Bifidobacterium | Folate | C19H19N7O6 | Vitamin | [106] |
Note: SCFA = Short chain fatty acid, TMAO = Trimethylamine N-oxide, LPS = Lipopolysaccharide.