REAGENT or RESOURCE	SOURCE	IDENTIFIER
Chemicals, peptides, and recombinant proteins
BPA (bis-(4-hydroxyphenyl)-propane	Sigma-Aldrich, Whitehouse Station, NJ	Cat# 239658
DMSO (dimethyl sulfoxide)	Sigma-Aldrich	Cat# D4540
Horse serum (HS)	Gibco, Grand Island, NY	Cat# 16050-122
Penicillin-streptomycin	Corning, Blacksburg, VA	Cat# 30-002-CI
RNA TRIzol	Invitrogen, Carlsbad, CA	Cat# 1559601
Chloroform	Sigma-Aldrich	Cat# 67-66-3
Isopropanol	Sigma-Aldrich	Cat# RD-34863
SYBR Green PCR master mix	Applied Biosystems, Foster City, CA	Cat# 4368706
Propidium iodide	Invitrogen	P3566
Low-melting agarose	Amresco, Solon, OH	Cat# 9012-36-6
RPMI-1640 medium	Gibco, Rockville, MD	Cat# 31800-022
Lipofectamine	Invitrogen	N/A
Critical commercial assays
High-capacity cDNA reverse transcription kit	Applied Biosystems	Cat# 4368814
Sybr green master mix	Applied Biosystems	Cat# 4368706
Comet assay kit	Trevigen Inc, Gaithersburg, MD	Cat# 4250-050-K
Deposited data
Microarray data sets of BPA exposure	ArrayExpress	E-GEOD-10270, E-GEOD-17624, E-GEOD-32158, E-GEOD-32160
Microarray data sets of non-Hodgkin lymphoma	ArrayExpress	E-GEOD-65135, E-GEOD-53820, E-GEOD-12195, E-GEOD-10524, E-GEOD-66384, E-GEOD-55267
Experimental models: Cell lines
Human lymphoblastoid TK6 cell line	ATCC	CRL-8015™
Human lymphoblastoid SUP-B15 cell line	ATCC	CRL-1929™
Oligonucleotides
Primer sequences of β-actin (sense): 5’-TTGTTACAGGAAGTCCCTTGCC-3’	Genomics, Xizhi District, Taiwan	N/A
Primer sequences of β-actin (anti-sense): 5’-ATGCTATCACCTCCCCTGTGTG-3’	Genomics, Xizhi District, Taiwan	N/A
Primer sequences of CTNNB1 (sense): 5’-ACCAGCCGACACCAAGAAG-3	Genomics, Xizhi District, Taiwan	N/A
Primer sequences of CTNNB1 (anti-sense): 5’-TCGAATCAATCCAACAGTAGCCT-3’	Genomics, Xizhi District, Taiwan	N/A
Primer sequences of NFKB1 (sense): 5’-CAATCATCCACCTTCATTCTCAAC-3	Genomics, Xizhi District, Taiwan	N/A
Primer sequences of NFKB1 (anti-sense): 5’-TCCACCACATCTTCCTGCTTA -3’	Genomics, Xizhi District, Taiwan	N/A
Primer sequences of AR (sense): 5’-TGCCCATACTCACTCAGATTCC-3’	Genomics, Xizhi District, Taiwan	N/A
Primer sequences of AR (anti-sense): 5’-CCACACCAACCAGACCTTTCC-3’	Genomics, Xizhi District, Taiwan	N/A
Primer sequences of IGF1 (sense): 5’-CACCACCTCCCTTCATAACCTT-3’	Genomics, Xizhi District, Taiwan	N/A
Primer sequences of IGF1 (anti-sense) 5’-TCTTGACGACTTGCTGCTGCT-3’	Genomics, Xizhi District, Taiwan	N/A
Primer sequences of TWIST1 (sense): 5’-CGGGAGTCCGCAGTCTTA-3’	Genomics, Xizhi District, Taiwan	N/A
Primer sequences of TWIST1 (anti-sense): 5’-GCTTGAGGGTCTGAATCTTG-3’	Genomics, Xizhi District, Taiwan	N/A
Primer sequences of TP53 (sense): 5’-CCTGAGGTGTAGACGCCAACT-3’	Genomics, Xizhi District, Taiwan	N/A
Primer sequences of TP53 (anti-sense): 5’-GTACTGTAGGAAGAGGAAGGAGAC-3’	Genomics, Xizhi District, Taiwan	N/A
Primer sequences of CDKN1A (sense): 5’-GGGACAGCAGAGGAAGACCAT-3’	Genomics, Xizhi District, Taiwan	N/A
Primer sequences of CDKN1A (anti-sense): 5’-GGAGTGGTAGAAATCTGTCATGCT-3’	Genomics, Xizhi District, Taiwan	N/A
CTNNB1 siRNA homo-960: F-5’CCCAAGCUUUAGUAAAUAUTT-3’ R-5’AUA UUUACUAAAGCUUGGGTT-3’	Integrated DNA Technologies, Coralville, IA	N/A
CTNNB1 siRNA homo-1996: F-5’GCCACAAGAUUACAAGAAATT-3’ R-5’UUUCUUGUAAUCUUGUGGCTT-3’	Integrated DNA Technologies, Coralville, IA	N/A
Software and algorithms
ModFit LTTM software	Verity Software House, Topsham, ME	http://www.vsh.com
Robust Multi-array Average	Weighted gene correlation network analysis (WGCNA)	N/A
Differentially expressed genes (D56EG)	NetworkAnalyst	http://www.networkanalyst.ca/
Gene ontology (GO)	DAVID	http://david.ncifcrf.gov
Cytoscape	Cytoscape Consortium	http://cytoscape.org
ClueGO	Cytoscape APP	N/A
CluePedia	Cytoscape APP	N/A
CaspLab	Comet assay software project (CASP)	N/A
Other
Affymetrix GeneChip	Thermo Fisher Scientific, Wilmington, MA	Human Genome U133 Plus 2.0
CometSlideTM	Trevigen, Gaithersburg, MD	N/A
Nanodrop 2000c	Thermo Fisher Scientific, Wilmington, MA	N/A
G:Box ChemiXT16 system	Syngene, Frederick, MD	N/A