Antibodies |
|
|
V5 |
Invitrogen |
R96025 |
V5/HRP |
Invitrogen |
R961-25 |
SMAD4 |
Santa Cruz Biotechnology |
B-8; sc-7966 |
beta-actin/HRP |
Santa Cruz Biotechnology |
sc-47778 HRP |
TRK |
Cell Signaling Technology |
A7H6R; #92991 |
FOSL1 |
Cell Signaling Technology |
D80B4, #5281 |
SMAD4 |
Cell Signaling Technology |
D3M6U, #38454 |
Histone H3 Ac-K27 |
AbCam |
ab4729 |
SMAD1 |
Santa Cruz |
sc-7965 |
Phospho-Smad1/5/8 |
Cell Signaling Technology |
41D10 |
Phospho-SMAD2 |
Cell Signaling Technology |
3101S |
GAPDH |
Cell Signaling Technology |
14C10 |
Bacterial and virus strains |
|
|
Metastasis Candidate ORF - Pool1 |
Broad Institute |
This manuscript |
Metastasis Candidate ORF - Pool2 |
Broad Institute |
This manuscript |
Metastasis Candidate ORF - Pool3 |
Broad Institute |
This manuscript |
Chemicals, peptides, and recombinant proteins |
|
|
Blasticidin |
ThermoFisher Scientific |
A1113903 |
Puromycin |
ThermoFisher Scientific |
A1113803 |
Hygromycin |
Life Technologies |
10687010 |
Doxycycline |
Clontech |
3P 631311 |
Recombinant TGFβ |
Peprotech |
AF-100-21C |
Critical commercial assays |
|
|
QiaAmp DNA Blood Maxi Kit |
QIAGEN |
51194 |
DNeasy Blood and Tissue kit |
QIAGEN |
69506 |
RNAlater-ICE Frozen Tissue Transition Solution |
ThermoFisher |
AM7030 |
Phusion high-fidelity DNA polymerase |
New England Biolabs |
M0530 |
TaqMan Universal PCR Master Mix |
ThermoFisher |
4364338 |
RNeasy Plus Mini kit |
QIAGEN |
74134 |
High-Capacity cDNA Reverse Transcription Kit |
ThermoFisher |
4368813 |
Power SYBR Green PCR Master Mix |
Invitrogen |
4367659 |
Deposited data |
|
|
SMAD4 RNA-seq |
This manuscript |
GSE148248 |
Experimental models: Cell lines |
|
|
Lenti-X 293T |
Takara |
632180 |
PANC1 |
Broad Institute |
Project Achilles |
PATU8902 |
Broad Institute |
Project Achilles |
HPAC |
Broad Institute |
Project Achilles |
MiaPaCa2 |
Broad Institute |
Project Achilles |
L3.3 |
Broad Institute |
Project Achilles |
PANC0327 |
Broad Institute |
Project Achilles |
Experimental models: Organisms/strains |
|
|
CrTac:NCr-Foxn1nu
|
Taconic |
NCRNU-F |
Recombinant DNA |
|
|
pXPR003-sgCTRL |
Broad Institute |
This study |
pXPR003-sgSMAD4 |
Broad Institute |
This study |
pLX307-luciferase |
Broad Institute |
This study |
pLX307-SMAD4 |
Broad Institute |
This study |
pXPR003-sgGFP |
Broad Institute |
This study |
PLKO shFOSL1-1 |
Broad Institute |
This study |
PLKO shFOSL1-2 |
Broad Institute |
This study |
FUW-LacZ-Luciferase-mCherry |
This manuscript |
This study |
FUW-SMAD4-Luciferase-mCherry |
This manuscript |
This study |
Software and algorithms |
|
|
Tophat 2.0.2 |
NA |
Ghosh and Chan, 2016 |
HTseq |
NA |
Anders et al., 2015 |
DEseq |
NA |
Love et al., 2014 |