Table 1. Recurrent HBV target genes.
Sample No | Sequencing | Cancer related genes | Cancer non-related genes | Reference |
---|---|---|---|---|
40 | MAPS | TERT [6], CCNA2 [1], KMT2B [1] | SMAD5 [2] | (7) |
81 | WGS | TERT [18], KMT2B [9], CCNE1 [4] | SEMP5 [3], ROCK1 [2] | (1) |
28 | Capture | TERT [7], KMT2B [5], CCNE1 [2] | (8) | |
79 | WES | TERT [17], KMT2B [6], CCNE1 [1], CCNA2 [1] | ALOX5 [2], ZFPM [2], SENP [2], MYO19 [2], RGS [2] | (10) |
22 | WGS | TERT [2], KMT2B [5] | (9) | |
426 | Capture | TERT [101], KMT2B [15], CCNE1 [7], CCNA2 [8] | ANKRD30BL [7], FAM157A [7], DDX11L1 [23] DDX11L5 [8], DDX11L9 [8] | (11) |
42 | Capture | TERT [8], KMT2B [6], CCNA2 [1] | (5) | |
154* | Capture | TERT [19], KMT2B [7], CCNE1 [1], CCNA2 [1] | DDX11L1 [2], DDX11L2 [2], DDX11L16 [2] CWH43 [2], DEBT [2], EYA1 [2], MACROD2 [2] PTPRD [2], ZNF595 [2] | (6) |
177 | Capture | TERT [48], KMT2B [3], CCNE1 [4], CCNA2 [1] | AHRR [2], NRG1 [2], TRIM161 [2], ST18 [2] | (4) |
*, including both patients with chronic and prior HBV infection. Data sets in which ≥20 cases were analyzed are chronologically listed. The numbers in square brackets correspond to the patient numbers. HBV, hepatitis B virus; MAPS, massive anchored parallel sequencing; WGS, whole-genome sequencing; WES, whole-exome sequencing.