Table 1. Summary of results of running Rephine.r for each phage group.
| Studiervirinae | Tevenvirinae | Pbunaviruses | |
|---|---|---|---|
| Number of genomes | 145 | 127 | 30 |
| Mean genome size | 39696 | 174775 | 66068 |
| Initial gene calls | 6956 | 35436 | 3540 |
| Initial gene clusters | 558 | 4067 | 195 |
| Initial core genes | 12 | 27 | 28 |
| Initial SCG size | 3 | 13 | 19 |
| New clusters after merging | 16 | 64 | 2 |
| Clusters involved in a merger | 63 | 270 | 5 |
| Biggest merger | 7 | 30 | 3 |
| Core genes after merging | 14 | 37 | 28 |
| SCG size after merging | 3 | 13 | 19 |
| Defragmented clusters | 14 | 99 | 17 |
| SCG size after fusion and merge | 8 | 22 | 26 |
| Additional fusions after merge | 1 | 7 | 1 |
| New core genes after final fusion | 0 | 0 | 0 |
| Total SCG gain | 5 | 9 | 7 |
| Mean tree support before | 77.14 | 87.24 | 63.6 |
| Mean tree support after | 90.55 | 93.44 | 69.57 |