TABLE 3.
Tomato chlorosis virus isolates available in GenBank with 3′ end nucleotide sequences identical to some of the variants detected in the viral progeny of agroinoculated Nicotiana benthamiana plants (Figure 3).
| RNA1 |
RNA2 |
||||
| Isolate | Acc. no. | Sequence (5′-3′) | Acc. no. | Sequence (5′-3′) | References |
| AT80/99-IC | KJ740256 | TAAATAAATAGGTCG | KJ740257 | TAAATAAATAGGTC- | Orílio et al., 2014 |
| ToC-Br2 | JQ952600 | TAAATAAATAGGC– | – | – | Albuquerque et al., 2013 |
| 2.5 | KJ200304 | TAAATAAATAGGTT- | – | – | Unpublished |
| MM8 | KJ200306 | TAAATAAATAGGTC- | – | – | Unpublished |
| Pl-1-2 | KJ200308 | TAAATAAATAGGTC- | – | – | Unpublished |
| XS | – | – | KY618797 | TAAATAAATAGGTCC | Kang et al., 2018 |
| FERA_160205 | KY810786 | TAAATAAATAGGTC- | – | – | Pecman et al., 2017 |
Nucleotide changes present in the mentioned variants with respect to the sequences of the infectious clones (isolate AT80/99-IC, included for comparison) are highlighted in bold and underlined.