Table 1.
Overview of data files/data sets
| Label | Name of data file/data set | File types (file extension) |
Data repository and identifier (DOI or accession number) |
|---|---|---|---|
| Data file 1 | Methods | PDF file (.pdf) | Figshare https://doi.org/10.6084/m9.figshare.14079866.v5 [20] |
| Data set 1 | Forty-Two reports and configuration files (662 individual samples) | Text files (.tsv,.csv,.yaml) | Figshare https://doi.org/10.6084/m9.figshare.12362699.v1 [21] |
| Data file 2 | Consolidation table | Spreadsheet (.xlsx) | Figshare https://doi.org/10.6084/m9.figshare.14727411.v3 [22] |
| Data file 3 | Sample consolidation report | Image file (.pdf) | Figshare https://doi.org/10.6084/m9.figshare.12154824.v3 [23] |
| Data file 4 | Redundancy drop analysis | Spreadsheet (.xlsx) | Figshare https://doi.org/10.6084/m9.figshare.12213731.v3 [24] |
| Data set 2 | Transcriptomes | FASTA files (.tar.gz) | Figshare https://doi.org/10.6084/m9.figshare.13634840.v1 [25] |
| Data file 5 | Sobek analysis summary | Text file (.csv) | Figshare https://doi.org/10.6084/m9.figshare.12410522.v3 [26] |
| Data set 3 | Forty-Two reports and configuration files (260 transcriptomes) | Text files (.tsv,.csv,.yaml) | Figshare https://doi.org/10.6084/m9.figshare.13006622.v1 [27] |
| Data file 6 | Consolidated sample purity (cross-contaminations) | Image file (.pdf) | Figshare https://doi.org/10.6084/m9.figshare.12173235.v3 [28] |
| Data file 7 | Consolidated sample purity (contaminations) | Image file (.pdf) | Figshare https://doi.org/10.6084/m9.figshare.12998726.v3 [29] |
| Data file 8 | Completeness analysis | Text file (.csv) | Figshare https://doi.org/10.6084/m9.figshare.12154833.v3 [30] |
| Data set 4 | Taxonomic samplings | Image files (.png,.html,) | Figshare https://doi.org/10.6084/m9.figshare.12401639.v1 [31] |
| Data set 5 | GAPDH phylogenies | Image files, text file (.pdf) | Figshare https://doi.org/10.6084/m9.figshare.13096208.v2 [32] |