Table 2.

Evaluation of FAIRness for 30 datasets accompanying 24 articles in molecular epidemiology of salmonids

Maturity indicator assessment													Source article
F1.1	F1.2	F2	F3	F4	A1	A2	I1	I2	I3	R1.1	R1.2	R1.3
0	0	2	0	2	2	0	1	2	2	2	2	0	[22] (PubMLST) + [23] (PubMLST) + [24] (PubMLST)
2	0	2	2	2	2	2	1	2	2	1	2	2	[22] (European Nucleotide Archive) + [25] (European Nucleotide Archive)
2	0	2	2	2	2	0	1	2	0	1	0	2	[26, 27] + [28] (Sequence Read Archive)
2	0	2	2	2	2	0	1	2	0	1	2	2	[29–35] + [23] (GenBank) + [24] (GenBank) + [28] (GenBank)
2	0	2	2	2	2	0	1	2	2	1	2	2	[36–43] + [44] (GenBank)
2	2	1	2	2	2	2	1	0	0	2	0	2	[45]
2	2	1	2	2	2	2	1	2	0	2	0	2	[25] (FigShare)
NE	NE	NE	NE	NE	NE	NE	NE	NE	NE	NE	NE	NE	[44] (Sequence Read Archive)

The scores correspond to whether a given maturity indicator was met (2), partially met (1) and not met (0), respectively (cf. Table 4). The mention NE corresponds to a resource which could not be evaluated given that the dataset accession number was invalid. Datasets which have obtained the same combination of scores on the 13 indicators are grouped in the same row. Given that six source articles had two datasets associated with them (deposited in separate repositories), their reference appears twice in this table. To distinguish them, the corresponding repository is indicated in brackets after the reference.