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. 2021 Aug 11;3(3):lqab070. doi: 10.1093/nargab/lqab070

Figure 1.

Figure 1.

A phylogenetic tree of 147 mycobacterial genomes showing close relationship of M. riyadhense and MTBC. The phylogeny was constructed using 147 available genomes by concatenating and aligning amino acid positions across 400 shared proteins automatically identified in the chosen genomes by PhyloPhlAn2 (35). Coloured shades highlight the M. riyadhense strains and MTBC. We annotated the growth rate, presence/absence of ESX systems (based on homology analysis), the number of annotated gene family members, the M. tuberculosis T/A orthologs for each strain external to the phylogeny. Branches are coloured based on the bootstrap values as shown in the legend in the left. The colour code of the gene families, ESX systems, growth rate and bootstrap range is listed on the left side figure legend.