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. 2021 Jul 30;15(7):e0009643. doi: 10.1371/journal.pntd.0009643

Table 2. Longitudinal detection of Cryptosporidium in stool and respiratory tract and associated symptoms.

Characteristics Study period
Enrollment (n = 37) 2 weeksa (n = 27) 4 weeksb (n = 24) 6 weeksc (n = 26) 8 weeksd (n = 25)
Cryptosporidium detection
Detection in NP 4 (11%) 5 (19%) 2 (8%) 1 (4%) 2 (8%)
    NP Ct values (SD) 33.5 (1.0) 33.7 (2.0) 35.6 (0.6) 35.7 36.6 (0.7)
Detection in sputum 11 (31%) 10 (37%) 10 (42%) 8 (31%) 5 (20%)
    Sputum Ct values (SD) 31.1 (4.4) 29.9(3.6) 33.0 (2.6) 34.3 (2.9) 35.7 (2.6)
Detection in GI tract 37 (100%) 22 (81%) 16 (67%) 11 (42%) 11 (44%)
    Stool Ct values (SD) 28.8 (4.3) 26.0 (4.5) 30.3 (2.8) 31.3 (3.5) 29.9 (4.1)
Detection in respiratory tract only 0 0 1 (4%) 3 (8%) 2 (8%)
Detection in GI tract only 27 (73%) 12 (43%) 7 (29%) 5 (19%) 8 (32%)
Detection in respiratory and GI tract 10 (27%) 9 (33%) 9 (26%) 6 (23%) 3 (12%)
Presentation
Referral to health facility for an illness in the past 7 days 36 (100%) 10 (37%) 6 (25%) 5 (19%) 7 (28%)
Diarrhea in the past 7 days 36 (100%) 0 2 (8%) 4 (15%) 3 (12%)
Respiratory symptoms in the past 7 dayse 26 (72%) 9/10 (90%) 4/6 (67%) 2/5(40%) 5/7 (71%)
    Cough 24 (69%) 5/10 (50%) 2/6 (33%) 2/5 (40%) 5/7 (71%)
    Runny nose 16 (46%) 7/10 (70%) 4/6 (67%) 1/5 (20%) 3/7 (43%)
    Difficulty in breathing 1 (3%) 0 0 0 0
    Wheezing 4 (11%) 3/10 (30%) 1/6 (17%) 1/5 (20%) 0
    Chest indrawings/ retractions 0 0 0 0 0
    Crackles 6 (17%) 5/10 (50%) 1/6 (17%) 1/5 (20%) 0/7
    Vomiting 16 (46%) 0/10 0/6 1/5 (20%) 0/7
    Abdominal pain/ tenderness 11 (31%) 1/10 (10%) 1/6 (17%) 1/5 (20%) 0/7
    Poor feeding 14 (40%) 0 0 0 0
Other household members with respiratory symptoms 13 (37%) 1/6 (17%) 3/5 (60%) 0 0
Other household members with GI symptoms 4 (11%) 0 3 (13%) 1 (4%) 2 (8%)
Vital signs
Respiratory rate, breaths/min (SD) 36 (6.1) 34.7 (3.4) 32.8 (3.2) 34.4 (5.7) 32.3 (3.7)
Oxygen saturations, % (SD) 98.6 (1.4) 99.1 (1.2) 98.5 (1.1) 99.4 (0.8) 98.8 (1.4)
Outcome
Mortality 1f (3%) 0 0 0 0

Ct, cycle threshold; GI, gastrointestinal; NP, nasopharynx; SD, standard deviation

aTwo children withdrew at enrollment, one child withdrew after enrollment, five did not enter follow-up due to early stopping of study, and three were lost to follow-up.

bThree children missed week 4 visit.

cOne child missed week 6 visit.

dTwo children did not complete week 8 visit due to early stopping of study.

eIn follow-up study visits, symptoms were recorded only if these led to health facility referral.

fPatient died after discharge before the week 2 visit.