TABLE 3.
Characteristics of Pseudoalteromonas alginate lyasesa
Strain | Isolation site | Protein name | Extra- or intracellular | Family | Substrate specificity | Action mode | Main products (DP)b | Optimal Tm (°C)b | Optimal pH | Ions positive for salt activationc | Reference |
---|---|---|---|---|---|---|---|---|---|---|---|
Pseudoalteromonas carrageenovora ASY5 | Mangrove soil | Aly1281 | Extra | PL7 | Bifunctional | Endotype | 2 | 50 | 8.0 | Na+, K+ | 39 |
Alg823 | Extra | PL6 | Bifunctional | Endotype | 2–3 | 55 | 8.0 | Na+, K+ | 40 | ||
Pseudoalteromonas sp. SM0524 | Marine rotten kelp | AlyPM | Extra | PL7 | Poly(M) | Endotype | 2–3 | 30 | 8.5 | Na+ | 16 |
aly-SJ02 | Extra | PL18 | Bifunctional | Endotype | 2–3 | 50 | 8.5 | Na+, K+, Mg2+, Ca2+, Co2+, Ba2+, Ni2+, Sr2+ | 25 | ||
Pseudoalteromonas citrea KMM 3297 | Coelomic liquid of the holothurian | AlI | Intra | — | Bifunctional | Endotype | 3–5 | 35 | — | Na+, Mg2+ | 29 |
AlII | Intra | — | — | Endotype | >3 | 45 | — | Na+, Mg2+ | 29 | ||
AlIII | Intra | — | Bifunctional | Endotype | >3 | 45 | — | Na+, Mg2+ | 29 | ||
Pseudoalteromonas sp. strain CY24 | Seawater of Jiaozhou Bay of China | AlyPI | Extra | PL7 | Bifunctional | Endotype | — | 40 | 7.0 | Na+, K+, Mn2+, Ca2+, Fe3+ | 17 |
Pseudoalteromonas atlantica AR06 | Coastal water in Japan | AlyA | Extra | PL18 | Bifunctional | Endotype | 2–4 | — | — | — | 37 |
Pseudoalteromonas elyakovii IAM 14594 | A decaying thallus of Laminaria - | alyPEEC | Extra | PL18 | Bifunctional | Endotype | >4 | 30 | 7.0 | Na+, K+, Mg2+, Ca2+, Ba2+, Mn2+ | 38 |
Pseudoalteromonas sp. 272 | Sea mud in Omura bay | — | Extra | PL18 | Bifunctional | Endotype | — | 25 | 7.5–8.0 | None | 94 |
Pseudoalteromonas sp. strain 1786 | Intestinal contents of an arthropod | — | Extra | — | Bifunctional | Endotype | 2–4 | 50 | 7.1–7.7 | Mg2+, Ca2+ | 95 |
—, not mentioned.
DP, degree of polymerization; Tm, melting temperature.
We only showed the ions that activated the enzyme activity.