TABLE 5.

P-values of Hotelling’s t-test comparing the prediction accuracy obtained with the individual SNP and haploblock approaches using WGS data.

r 21	GHBLUP_WGS			GHBLUP+GBLUP_WGS
	DP	MP	RERW	DP	MP	RERW
0.2	0.311	0.835	0.012	0.999	0.998	0.040
0.3	0.643	0.938	0.218	0.717	0.837	0.047
0.4	0.852	0.769	0.142	0.829	0.946	0.588
0.5	0.908	0.670	0.047	0.939	0.357	0.161
0.6	0.869	0.796	0.111	0.902	0.875	0.095
0.7	0.956	0.997	0.088	0.997	0.833	0.074
0.8	0.833	0.992	0.036	0.936	0.628	0.025

¹Seven different LD thresholds set from r² ≥ 0.2 to r² ≥ 0.8.