TABLE 1.
Pt64 assembly statistics and completeness evaluation.
| Contig assembly statistics | ||
| Assembly | Pt64_primary_contigs | Pt64_haplotigs |
| Number of contigs | 218 | 1274 |
| Largest contig (bp) | 5,240,940 | 3,723,857 |
| Total length (bp) | 144,895,289 | 140,347,126 |
| GC (%) | 46.63 | 46.67 |
| N50 (bp) | 1,939,216 | 702,014 |
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| Scaffolded assembly statistics | ||
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| Assembly | Pt64_haplotypeA | Pt64_haplotypeB |
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| Number of scaffolds | 18 | 18 |
| Number of unscaffolded contigs | 14 | 14 |
| Largest scaffold (bp) | 12,087,149 | 12,265,344 |
| Total length (bp) | 148,180,388 | 147,118,663 |
| GC (%) | 46.64 | 46.64 |
| N50 (bp) | 9,506,076 | 9,370,800 |
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| Scaffolded assembly BUSCOs | Pt64_haplotypeA | Pt64_haplotypeB |
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| Complete BUSCOs (%) | 92.2 | 92.6 |
| Complete and single-copy BUSCOs (%) | 85.8 | 85.8 |
| Complete and duplicated BUSCOs (%) | 6.4 | 6.8 |
| Fragmented BUSCOs (%) | 4.3 | 3.4 |
| Missing BUSCOs (%) | 3.5 | 4.0 |