TABLE 3.

Gene prediction and functional annotation for haplotypes of Pt64 assembly.

	Pt64 haplotype A	Pt64 haplotype B
Gene prediction
Total number of genes	29,871	29,821
Mean gene length (bp)	1,379	1,399
genome % covered by genes	27.8	28.4
Total number of proteins	28,699	28,656
Secretome prediction
Secreted proteins (SPs)	2,175	1,899
SP % of total proteins	7.6	6.6
Functional annotation
CAZy enzymes total number	435	427
CAZy enzymes GHa number	228	224
Proteases total number	306	308
Ab	24	30
Cb	72	68
Mb	71	75
Sb	104	99
Tb	26	27
Ib	9	9

^aGH, glycoside hydrolase.

^bFive classes of peptidases including serine (S), cysteine (C), metallo (M), threonine (T), and aspartic proteases (A) as well as one protease inhibitors class (I).