Table 1.
Known disease loci used for simulation
| Chromosome | Start | End | Gene | Motif |
|---|---|---|---|---|
| chr2 | 176,093,057 | 176,093,099 | HOXD13 | GGC |
| chr3 | 63,912,685 | 63,912,715 | ATXN7 | CAG |
| chr4 | 3,074,876 | 3,074,933 | HTT | CAG |
| chr5 | 146,878,728 | 146,878,758 | PPP2R2B | CTG |
| chr6 | 16,327,635 | 16,327,722 | ATXN1 | CTG |
| chr7 | 27,199,924 | 27,199,966 | HOXA13 | CGC |
| chr9 | 69,037,286 | 69,037,304 | FXN | GAA |
| chr11 | 119,206,289 | 119,206,322 | CBL | CGG |
| chr12 | 111,598,950 | 111,599,019 | ATXN2 | CTG |
| chr13 | 70,139,383 | 70,139,428 | ATXN8 | CTG |
| chr14 | 92,071,010 | 92,071,034 | ATXN3 | CTG |
| chr16 | 87,604,287 | 87,604,329 | JPH3 | CTG |
| chr19 | 45,770,204 | 45,770,264 | DMPK | CAG |
| chr20 | 2,652,733 | 2,652,775 | NOP56 | GGCCTG |
| chr21 | 43,776,443 | 43,776,479 | CSTB | CGCGGGGCGGGG |
| chr22 | 45,795,354 | 45,795,424 | ATXN10 | ATTCT |
| chrX | 147,912,050 | 147,912,110 | FMR1 | CGG |