TABLE 3.
L | Chr | SNP discovery sample | SNP replication sample | Posa | OR [95% CI] | p valueb | Directionc |
---|---|---|---|---|---|---|---|
1 | 1 | rs11579212 | rs11579212 | 222072819 | 1.58 [1.16–2.15] | 3.50 × 10−3 | + |
2 | 2 | rs6541998 | rs6541998 | 112785237 | 1.04 [0.78–1.40] | 0.78 | + |
3 | 2 | rs10184573 | rs10184573 | 200448253 | 1.74 [1.29–2.34] | 2.78 × 10−4 | + |
4 | 6 | rs2499799 | rs976357 (r 2 = 1.0) | 96849679 | 0.44 [0.30–0.64] | 2.76 × 10−5 | + |
Chromosomal positions in GRCh37/hg19 coordinates for the replication SNP.
Significant result (p < 0.05/4).
Direction; Same (+) or opposite (−) direction of association for discovery and replication analyses.
Chr = chromosome; CI = confidence interval; L = locus number; OR = odds ratio; Pos = chromosomal position; SNP = single nucleotide polymorphism.