TABLE 3.
Top 10 RNA-binding proteins predicted by catRAPID and their abundance in mass spectrometry.
| Rank | Protein | Description* | Abundance detected by mass spectrometry |
|||
| 18s | ac-18s | FUS | ac-FUS | |||
| 1 | TBL3 | Transducin beta-like protein 3 | – | – | – | 200,111 |
| 2 | MGN2 | Protein mago nashi homolog 2 | – | – | – | – |
| 3 | MGN | Protein mago nashi homolog | – | – | – | – |
| 4 | PIWL2 | Piwi-like protein 2 | – | – | – | – |
| 5 | LRRF2 | Leucine-rich repeat flightless-interacting protein 2 | – | – | – | – |
| 6 | MSH4 | MutS protein homolog 4 | – | – | – | – |
| 7 | EXOS6 | Exosome complex component MTR3 | – | – | – | – |
| 8 | POP1 | Ribonucleases P/MRP protein subunit POP1 | – | – | – | – |
| 9 | SF3B2 | Splicing factor 3B subunit 2 | – | – | – | – |
| 10 | HNRDL | Heterogeneous nuclear ribonucleoprotein D-like | 2,314,101 | 1,736,563 | 572,541 | 837,440 |
| 10 | PTBP1 | Polypyrimidine tract-binding protein 1 | 723,724 | 466,609 | 321,505 | – |
*Annotation was made according to UniProt database (https://www.uniprot.org/).