Table 1.

Significantly enriched KEGG pathways between Shanhua15 and Zhonghua12 peanuts testa.

No.	Pathway	DEGs with pathway annotation	All genes with pathway annotation	P value	Corrected P value	Pathway ID
S4 vs. Z4
1	Biosynthesis of secondary metabolites	377	2759	2.7E-09	7.5 E-07	ko01110
2	Flavonoid biosynthesis	43	162	6.8E-09	1.9E-06	ko00941
3	Cell cycle–yeast	38	152	2.8E-07	7.8E-05	ko04111
S7 vs. Z7
1	Flavonoid biosynthesis	36	162	4.7E-13	1.3E-10	ko00941
2	Circadian rhythm–plant	36	162	4.7E-13	1.3E-10	ko04712
3	Biosynthesis of secondary metabolites	213	2759	6.1E-10	1.6E-07	ko01110
4	Phenylpropanoid biosynthesis	50	452	6.1E-07	0.00016	ko00940
S4 vs. S7
1	Metabolic pathways	503	4863	5.9E-17	1.6E-14	ko01100
2	Biosynthesis of secondary metabolites	314	2759	1.4E-11	3.8E-09	ko01110
3	Flavonoid biosynthesis	38	162	4.9E-10	1.3E-07	ko00941
Z4 vs. Z7
1	Biosynthesis of secondary metabolites	551	2759	0	0	ko01110
2	Metabolic pathways	837	4863	9.6E-10	2.8E-07	ko01100
3	Photosynthesis–antenna proteins	18	28	3.1E-09	9.1E-07	ko00196

S4, Shanhua15 R4 pod period; Z4, Zhonghua12 R4 pod period; S7, Shanhua15 R7 pod period; Z7, Zhonghua12 R7 pod period. Significant pathways were identified by corrected P ≤ 0.01.