Table 3. Breed wise details of estimated Genetic Diversity Indices for each microsatellite markers.
Locus | Expected Heterozygosity (He) | Theta H (θH) | Number of alleles (Na) | F ST | p-Value of FST estimation | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Nilli-Ravi | Murrah | Gojri | Nilli-Ravi | Murrah | Gojri | Nilli-Ravi | Murrah | Gojri | |||
BM1818 | 0.69 | 0.68 | 0.71 | 2.29 | 2.17 | 2.49 | 7 | 9 | 6 | 0.029 | 0.078 |
CSSM19 | 0.74 | 0 | 0.73 | 2.80 | 0 | 2.75 | 6 | 0 | 6 | NE | NE |
CSSM33 | 0.71 | 0.73 | 0.63 | 2.49 | 2.67 | 1.74 | 8 | 9 | 7 | 0.194 | 0.00001 |
CSSM45 | 0.65 | 0.80 | 0.73 | 1.87 | 3.98 | 2.72 | 5 | 6 | 6 | 0.204 | 0.00001 |
CSSM47 | 0.81 | 0.69 | 0.82 | 4.23 | 2.25 | 4.63 | 10 | 10 | 11 | 0.175 | 0.00001 |
CSSM66 | 0.79 | 0.61 | 0.82 | 3.67 | 1.60 | 4.43 | 7 | 6 | 9 | 0.176 | 0.00001 |
Hel013 | 0.67 | 0.75 | 0.82 | 2.08 | 3 | 4.49 | 8 | 8 | 9 | 0.139 | 0.00001 |
ILSTS19 | 0.14 | 0.17 | 0.12 | 0.16 | 0.20 | 0.14 | 2 | 6 | 3 | 0.809 | 0.00001 |
ILSTS25 | 0.58 | 0.61 | 0.72 | 1.39 | 1.59 | 2.52 | 5 | 6 | 8 | 0.179 | 0.00001 |
ILSTS26 | 0.67 | 0.61 | 0.76 | 2.05 | 1.57 | 3.26 | 6 | 6 | 5 | 0.084 | 0.00001 |
ILSTS28 | 0.76 | 0.76 | 0.76 | 3.25 | 3.16 | 3.21 | 8 | 7 | 6 | 0.002 | 0.7165 |
ILSTS29 | 0.33 | 0.26 | 0.82 | 0.49 | 0.35 | 4.49 | 6 | 4 | 10 | 0.376 | 0.00001 |
ILSTS30 | 0.71 | 0.60 | 0.69 | 2.45 | 1.47 | 2.25 | 7 | 6 | 6 | 0.194 | 0.00001 |
ILSTS33 | 0.66 | 0.68 | 0.59 | 1.99 | 2.14 | 1.47 | 6 | 7 | 3 | 0.005 | 0.51026 |
ILSTS36 | 0.66 | 0.67 | 0.72 | 1.98 | 2.03 | 2.58 | 6 | 6 | 12 | 0.160 | 0.00001 |
ILSTS52 | 0.67 | 0 | 0.73 | 2.00 | 0 | 2.72 | 9 | 0 | 8 | NE | NE |
ILSTS56 | 0.40 | 0.53 | 0.59 | 0.67 | 1.12 | 1.45 | 5 | 7 | 8 | 0.345 | 0.00001 |
ILSTS58 | 0.81 | 0.85 | 0.77 | 4.24 | 5.70 | 3.40 | 7 | 9 | 11 | 0.088 | 0.00001 |
ILSTS60 | 0.45 | 0.36 | 0.60 | 0.81 | 0.57 | 1.53 | 4 | 3 | 14 | 0.016 | 0.18573 |
ILSTS61 | 0.66 | 0.81 | 0.76 | 1.91 | 4.23 | 3.23 | 6 | 13 | 11 | 0.178 | 0.00001 |
ILSTS089 | 0 | 0.79 | 0.76 | 0 | 3.76 | 3.14 | 0 | 6 | 6 | NE | NE |
ILSTS95 | 0.80 | 0.71 | 0.71 | 4.08 | 2.43 | 2.48 | 10 | 11 | 8 | 0.061 | 0.00001 |
Mean | 0.61 | 0.58 | 0.70 | 1.55 | 1.36 | 2.33 | 6.27 | 6.59 | 7.86 | 0.18 | – |
SD | 0.22 | 0.25 | 0.15 | – | – | – | 2.33 | 3.10 | 2.83 | – | – |
Note:
NE, not estimable in the global analysis of molecular variance.