TABLE 2.
The primers used in the LAMP assay for the detection of Mycobacterium tuberculosis.
Gene | Primer | Sequence (5′–3′)a | Length (nt)b |
IS6110 | IS-F3 | 5′-GCCCCGATGGTTTGCG-3′ | 16 |
IS-B3 | 5′-GGGTTAGCCACACTTTGCG-3′ | 19 | |
IS-FIP* | 5′-FAM-TAGGTCGATGGGGCGATCGG-GGGTGTCGAGTCGATCTGC-3′ | 40 | |
IS-BIP | 5′-GCGCGATGGCGAACTCAAGG-GGCACCGTAAACACCGTAG-3′ | 40 | |
IS-LF | CAGCTCGGTCAGCTGTGT-3′ | 18 | |
IS-LB | 5′-CACATCAGCCGCGTCCA-3′ | 17 | |
mtp40 | mtp-F3 | 5′-GGCGGTCATGTTGGGAAC-3′ | 18 |
mtp-B3 | 5′-CCAACATCGACGCAGTACC-3′ | 19 | |
mtp-FIP* | 5′-Dig-GCTGATGGTCTCCGACACGTT-GAACCGGGCGCGAATC-3′ | 38 | |
mtp-BIP | 5′-GCGGCTGTACGGCGAAATGA-CGGGTCCGGTGGCATT-3′ | 37 | |
mtp-LF | CCACACCTCGCAATTGAAGTT-3′ | 21 | |
mtp-LB | 5′-TGCAGGGAACGCGAAAACC-3′ | 19 |
aFAM, 6-carboxyfluorescein; Dig, digoxigenin.
bnt, nucleotide.