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. 2021 Feb 4;73(4):672–679. doi: 10.1093/cid/ciab090

Table 4.

In Silico Functional Analysis of the Associated Variant with Chronic Chagas Cardiomyopathy Development

Chr SNP Nearest gene eQTLs C-HiC Genes PheWAS
11 rs2458298 SAC3D1 NAALADL1 SNX15 a BATF2 in GM12878b Hypertension, high blood pressure and abdominal aortic aneurysm
FERMT3 b

aeGENE in heart atrial appendage and heart left ventricle

blymphoblastoid cell line

Queried data bases were Open Targets Genetics, GTEx, RegulomeDB, Capture HiC Plotter, and PheWEB

Abreviations: Chr, chromosome; C-HiC, capture Hi-C; eQTL, expression quantitative trait loci; PheWAS, phenome-wide association study; SNP, single nucleotide polymorphism.