Table 4.
In Silico Functional Analysis of the Associated Variant with Chronic Chagas Cardiomyopathy Development
| Chr | SNP | Nearest gene | eQTLs | C-HiC Genes | PheWAS |
|---|---|---|---|---|---|
| 11 | rs2458298 | SAC3D1 NAALADL1 | SNX15 a | BATF2 in GM12878b | Hypertension, high blood pressure and abdominal aortic aneurysm |
| FERMT3 b |
aeGENE in heart atrial appendage and heart left ventricle
blymphoblastoid cell line
Queried data bases were Open Targets Genetics, GTEx, RegulomeDB, Capture HiC Plotter, and PheWEB
Abreviations: Chr, chromosome; C-HiC, capture Hi-C; eQTL, expression quantitative trait loci; PheWAS, phenome-wide association study; SNP, single nucleotide polymorphism.